Pairwise Alignments

Query, 444 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 71.2 bits (173), Expect = 6e-17
 Identities = 92/403 (22%), Positives = 171/403 (42%), Gaps = 25/403 (6%)

Query: 12  KQLFQMTWPMLFGVLSLMSFQLVDSAFIGQLGVLPLAAQGFTMPIQMVIIGIQVGLGIAT 71
           ++L  +  P+    +   S  LVD   +GQLG   +AA G       V   + VG+    
Sbjct: 17  RRLIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTTIMLVGVTTGG 76

Query: 72  TAVISRAIGAGKTEYAKQLGGLVIVIGGIGVALIALVLYLLRQPLLGLLGAPETVFAIID 131
             + ++  GAG  +  ++   L  ++         L+     Q ++ L    E V A+  
Sbjct: 77  ALLTAQYWGAGDRKGVRESTALTWLVSNFFAFFTVLLFLFFPQQIMSLTTDSEQVNALGS 136

Query: 132 HYWL----WWLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNLILDPIF-IFTFD 186
            Y +       A A   +M     ++ +   +T   G  ++   VLN IL  IF  F F 
Sbjct: 137 QYLIITSFTMFAVACVSSMAVGLRAMHKPGVSTFFSGIGIVSNVVLNWIL--IFGKFGFP 194

Query: 187 -LGIDGAAIATIIAFGVGIA-IVAPKVAQRQWTSYQWQDLNISQSLTALGHIMG---PAM 241
            +GI GAAIAT+++  + IA + +    ++   ++ WQD+        +   +    P  
Sbjct: 195 AMGIQGAAIATVLSGAIEIACLYSYLYGKKHLMAFGWQDIKAVIDWPKISRFLRLSLPTT 254

Query: 242 LSQLLPPLSSMFATKLLASFGTAAVAAWALGSRFEFFALVAVLAMTMSLPPMIGRMLGAK 301
            + L+          ++   G   +AA ++ +  E  +L  ++ M+ +   ++G  LGAK
Sbjct: 255 FNFLIWAAGLFTYHAIMGQTGVQGLAALSVMTPVESISLSLLIGMSTAAAVLVGNQLGAK 314

Query: 302 --EITHIRQLVRIACQFVLGFQLLIALVTYVFATPLAELMTSET----EVSQ----ILNL 351
             E  + + +   AC  ++G  +++A+  Y+   P+    T+ T    E+S+    IL L
Sbjct: 315 NYEAVYYQAIGVTACSVLVG--IVVAIGLYLVQIPVLGAFTALTPETRELSEKFMLILCL 372

Query: 352 HLVIVPISLGAL-GICMLMVSVANALGKSYVALTISALRLFAF 393
            +V+    + A+ G+      V   LG+  VA     + L AF
Sbjct: 373 GIVLRSFPMTAIVGVLRAGGDVKFCLGQDIVAQWCIGIPLAAF 415