Pairwise Alignments

Query, 444 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., MATE efflux family protein from Pseudomonas putida KT2440

 Score = 70.9 bits (172), Expect = 8e-17
 Identities = 105/445 (23%), Positives = 188/445 (42%), Gaps = 40/445 (8%)

Query: 12  KQLFQMTWPMLFGVLSLMSFQLVDSAFIG------QLGVLPLAAQGFTMPIQMVIIGIQV 65
           ++++ +  PM+   +S+    LVDS  IG      QLG + + A  FT      ++G+  
Sbjct: 15  RKVWALAAPMILSNISVPLVALVDSTVIGHLPHAHQLGAVAVGATLFTF-----MVGLMG 69

Query: 66  GLGIATTAVISRAIGAGKTEYAKQL--GGLVIVIG-GIGVALIALVLYLLR----QPLLG 118
            L + +T   ++A G G     +Q+   GL++ +G  + + L+AL    L     QP   
Sbjct: 70  FLRMGSTGFAAQAAGRGDGAALRQVLVQGLLLAVGFALLIGLLALPFSQLALHAMQPSAA 129

Query: 119 LLGAPETVFAIIDHYWLWWLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNLILD 178
           L  + E  F    H  L  L +A     L  ++       N   P  +++ T++LN+ L+
Sbjct: 130 LQQSTEDFF----HTRLLGLPAALASYALVGWFL---GTQNARAPLAILLTTNLLNIALN 182

Query: 179 PIFIFTFDLGIDGAAIATIIAFG----VGIAIVAPKVAQRQWTSY-QWQDLNISQSLTAL 233
             F+   D G+ G+A A++IA      +G+A+  P  A R +     W  L   Q+   L
Sbjct: 183 LWFVLGLDWGVLGSARASVIAEWSAALLGLALTRP--ALRAYPGQIVWAALKRWQAWRPL 240

Query: 234 GHIMGPAMLSQLLPPLSSMFATKLLASFGTAAVAAWALGSRFEFFALVAVLAMTMSLPPM 293
             +     L  L   L  +  T   A  G A VAA AL          A+  +  ++  +
Sbjct: 241 LAVNRDIFLRSLALQLVFLLITVQGARLGEATVAANALLLNGLLLTAYALDGLAHAVEAL 300

Query: 294 IGRMLGAKEITHIRQLVRIACQF----VLGFQLLIALVTYVFATPLAELMTSETEVSQIL 349
            G  +GA++   +R+ + +AC +     LGF  L  L  ++F     ++ +        L
Sbjct: 301 CGHAIGARDRDTLRRSLVVACGWSLITSLGFAGLFLLGGHLFIDLQTDIESVRAAAYPYL 360

Query: 350 NLHLVIVPISLGALGICMLMVSVANALGKSYVALTISALRLFAFYLPCLWLGAHFYGIEG 409
               ++  I++ +  +  L +    A  +   A+ +S L      +    LG H  G+  
Sbjct: 361 PYLALLPLIAVWSYLLDGLFIGATRA-REMRNAMLVSVLIALPVAVAMSGLGNH--GLWM 417

Query: 410 LFIGAL-VGNIIAGWAAWLAYQKAL 433
            F+G + +  +  GW  W   Q+ L
Sbjct: 418 AFLGFMGLRAVTLGWVGWRLQQRDL 442