Pairwise Alignments

Query, 444 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., MATE family efflux transporter from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 92.4 bits (228), Expect = 3e-23
 Identities = 86/412 (20%), Positives = 178/412 (43%), Gaps = 21/412 (5%)

Query: 34  VDSAFIGQLGVLPLAAQGFTMPIQMVIIGIQVGLGIATTAVISRAIGAGKTEYAKQLGGL 93
           VD  F+ ++G+  ++A G T  I  +   + + +G+A    ++ A+GA + E A+ +   
Sbjct: 43  VDVYFVSKIGLAEVSAIGATNAILAIYFAVFMAIGVAANVRVANALGAKQVERARHIAQQ 102

Query: 94  VIVIGGIGVALIALVLYLLRQPLLGLLGAPETVFAIIDHYWLWWLASAWTGAMLYFYYSV 153
            I++  +   L  +V     +PLL L+G  E V  I ++Y+      +   ++++   + 
Sbjct: 103 AIILSILFGILTGIVTLFFARPLLTLMGLEEQVLDIGENYFRVVGIPSVFMSLMFALSAN 162

Query: 154 CRANGNTLLPGTLMMVTSVLNLILDPIFIFTF----DLGIDGAAIATIIAFGVGIAIVAP 209
            R +GNT  P  + ++ ++ + +L    IF F    ++G+ GAA+AT+ +  +G  ++  
Sbjct: 163 LRGSGNTRAPMKVSIIINIFHALLGYALIFGFWIFPEMGVTGAALATVASRVLGTLLLVY 222

Query: 210 KVAQRQWTSYQ---WQ-DLNISQSLTALGHIMGPAMLSQLLPPLSSMFATKLLASFGTAA 265
            + + +  +++   W  D    + L  LG    PA    L+     +     + S GT  
Sbjct: 223 YIQRSEVLAFRKDFWSVDWGHQKELATLG---SPAAGEVLIMRAGQIVYFGFIVSLGTNV 279

Query: 266 VAAWALGSRFEFFALVAVLAMTMSLPPMIGRMLGAKEITHIRQLVRIACQFVLGFQLLIA 325
            AA  +    E  + +A      ++  + G+ +GA  I       +I     +G   ++ 
Sbjct: 280 FAAHQIAGNVEVISYMAGYGFATAVTILAGQQIGAGRIEEAVSFTKIGAWMAVGIMGVLG 339

Query: 326 LVTYVFATPLAELMTSETEVSQILNLHLVIVPISLGALGICMLMVSVANALGKSYVALTI 385
           L+ +        L + + EV   +   L +       L   + +     A   +   + +
Sbjct: 340 LLLFFLGEWAGSLFSQDPEVISKIGNALKVSGAFQPFLAALLTLTGAYQAANNTKFPMYL 399

Query: 386 SALRLFAF-----YLPCLWLGAHFYGIEGLFIGALVGNIIAGWAAWLAYQKA 432
           +A  ++A      Y   + LG   +G+ G++I   +G  I   A  LAY+ A
Sbjct: 400 TAAGMWAIRTVLVYYLGITLG---WGLTGVWIA--IGIDIVTRAGVLAYKFA 446



 Score = 39.7 bits (91), Expect = 2e-07
 Identities = 30/150 (20%), Positives = 59/150 (39%)

Query: 239 PAMLSQLLPPLSSMFATKLLASFGTAAVAAWALGSRFEFFALVAVLAMTMSLPPMIGRML 298
           PA++               ++  G A V+A    +          +A+ ++    +   L
Sbjct: 29  PAVVENFFQTFIGFVDVYFVSKIGLAEVSAIGATNAILAIYFAVFMAIGVAANVRVANAL 88

Query: 299 GAKEITHIRQLVRIACQFVLGFQLLIALVTYVFATPLAELMTSETEVSQILNLHLVIVPI 358
           GAK++   R + + A    + F +L  +VT  FA PL  LM  E +V  I   +  +V I
Sbjct: 89  GAKQVERARHIAQQAIILSILFGILTGIVTLFFARPLLTLMGLEEQVLDIGENYFRVVGI 148

Query: 359 SLGALGICMLMVSVANALGKSYVALTISAL 388
               + +   + +     G +   + +S +
Sbjct: 149 PSVFMSLMFALSANLRGSGNTRAPMKVSII 178



 Score = 37.4 bits (85), Expect = 1e-06
 Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 13/216 (6%)

Query: 12  KQLFQMTWPMLFGVLSLMSFQLVDSAFIGQLGVLPLAAQGFTMPIQMVIIGIQVGLGIAT 71
           K+L  +  P    VL + + Q+V   FI  LG    AA      ++++      G   A 
Sbjct: 245 KELATLGSPAAGEVLIMRAGQIVYFGFIVSLGTNVFAAHQIAGNVEVISYMAGYGFATAV 304

Query: 72  TAVISRAIGAGKTEYAKQLG--GLVIVIGGIGVALIALVLYLLRQPLLGLLGA-PETVFA 128
           T +  + IGAG+ E A      G  + +G +GV  + L+L+ L +    L    PE +  
Sbjct: 305 TILAGQQIGAGRIEEAVSFTKIGAWMAVGIMGV--LGLLLFFLGEWAGSLFSQDPEVISK 362

Query: 129 IIDHYWLWWLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNLILDPIFIF----T 184
           I +   +      +  A+L    +   AN NT  P   M +T+     +  + ++    T
Sbjct: 363 IGNALKVSGAFQPFLAALLTLTGAYQAAN-NTKFP---MYLTAAGMWAIRTVLVYYLGIT 418

Query: 185 FDLGIDGAAIATIIAFGVGIAIVAPKVAQRQWTSYQ 220
              G+ G  IA  I       ++A K A+  W + +
Sbjct: 419 LGWGLTGVWIAIGIDIVTRAGVLAYKFAKGTWMNLE 454