Pairwise Alignments

Query, 444 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., bll6904; probable cation efflux system protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  105 bits (261), Expect = 4e-27
 Identities = 101/435 (23%), Positives = 191/435 (43%), Gaps = 36/435 (8%)

Query: 10  LAKQLFQMTWPMLFGVLSLMSFQLVDSAFIGQLGVLPLAAQGFTMPIQMVIIGIQVG-LG 68
           L   LF++  P + G+ ++      D   +G +G   LA      P+ M+++ +  G +G
Sbjct: 18  LLPTLFRLATPNVMGLFAMTIVIGYDGYILGLVGADALAGIALVFPLSMLMLQMSAGGIG 77

Query: 69  IATTAVISRAIGAGKTEYAKQLGGLVIVIGGIGVALIALVLYLLRQPLLGLLGAPETVFA 128
            ATTA ++RA+GAG+ E A +L    ++I     AL+A++       +  +LG    +FA
Sbjct: 78  GATTAAVARALGAGQREDAGRLAQQALLIA----ALLAVLF------MGAMLGGGRGIFA 127

Query: 129 IIDHYW------LWWLASAWTGAMLYFYYSVC----RANGNTLLPGTLMMVTSVLNLILD 178
            +          L +  + + GA + ++ +V     R  GN LLP  +++ T++L+L L 
Sbjct: 128 AMGGRGPALDAALAYSNALFAGAAVIWFTNVLAAVVRGAGNMLLPSLMLVATALLHLGLS 187

Query: 179 PIFIFTFD----LGIDGAAIATIIAFGVGIAIVAPKVAQRQWTSYQ-----WQDLNISQS 229
           P+ +F +     +G+ GAA++T+    +   ++   + +R    +      W  L + + 
Sbjct: 188 PLLVFGWGPVPGIGVAGAALSTLTVNALSAVVMVAWLLRRDGAVHLGRTPWWPRLALWRD 247

Query: 230 LTALGHIMGPAMLSQLLPPLSSMFATKLLASFGTAAVAAWALGSRFEFFALVAVLAMTMS 289
           +  +G    PA LS ++   S   AT  +  +GTAA+A + + +R E+  +        +
Sbjct: 248 ILRVGL---PASLSPVISNASIAVATAFVGHYGTAALAGYGVAARLEYILVPIAFGFGTA 304

Query: 290 LPPMIGRMLGAKEITHIRQLVRIACQFVLGFQLLIALVTYVFATPLAELMTSETEVSQIL 349
           L  M+   +GA + T   ++       V      I + T +       L T +  V    
Sbjct: 305 LTAMVATNMGAGQATRAVRVAWAGGAVVAAITGAIGVATAIAPGLWMNLFTQDAAVRAFG 364

Query: 350 NLHLVIVPISLGALGICMLMVSVANALGKSYVALTISALRLFAFYLPCLWLGAHFY--GI 407
             +L IV    G  G+ + +   +   G+ +  L  S  RL    +   WL  H +    
Sbjct: 365 ADYLNIVGGCYGFFGLGLALFFASQGAGRMFWPLAGSMGRLLILVVGG-WLCVHVFQTSA 423

Query: 408 EGLFIGALVGNIIAG 422
            GLF    +  ++ G
Sbjct: 424 SGLFAVIALSLVVYG 438