Pairwise Alignments

Query, 444 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., Multidrug export protein MepA from Azospirillum sp. SherDot2

 Score =  118 bits (296), Expect = 4e-31
 Identities = 105/430 (24%), Positives = 196/430 (45%), Gaps = 15/430 (3%)

Query: 6   STSSLAKQLFQMTWPMLFGVLSLMSFQLVDSAFIGQLGVLPLAAQ-GFTMPIQMVIIGIQ 64
           +T S  + +  MT     G++++ +  L++  +I  LG   LAA  GF   +  +   + 
Sbjct: 10  TTGSPMRHVMVMTATGSVGLIAVFAVDLLNLFYISLLGERELAAAVGFAGTVLFLQSSLC 69

Query: 65  VGLGIATTAVISRAIGAGKTEYAKQLGGLVIVIGGIGVALIALVLYLLRQPLLGLLGAPE 124
           +GL I   A+++RAIG G+   A +L G  +++  +  A + L+   L  P + LLGA  
Sbjct: 70  IGLSIGAGALVARAIGGGRRAEAARLAGSSLILTALVSAAVGLLTLPLLGPAMDLLGARG 129

Query: 125 TVFAIIDHYWLWWLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNLILDPIFIFT 184
               +   Y      +     +     ++ RA G+     T+ +  ++    L+PI IF+
Sbjct: 130 ATRDLAVGYLTILSPTLPLLGLGMGCSAMLRAQGDARRAMTVTLYAALFTAALNPILIFS 189

Query: 185 FDLGIDGAAIATIIAFGV-------GIAIVAPKVAQRQWTSYQWQDLNISQSLTALGHIM 237
             L + GAA+  +++  +       G+A V   VA   WT        ++ S T  G I 
Sbjct: 190 LRLDLTGAAVTVVLSRCLLAAVGWHGVARVHRLVAAPGWTGL------LTDSGTLAG-IA 242

Query: 238 GPAMLSQLLPPLSSMFATKLLASFGTAAVAAWALGSRFEFFALVAVLAMTMSLPPMIGRM 297
           GPA+L+ L  P++ ++ T  +A FG AA+A  A+  R    A   + A+T ++ P++ + 
Sbjct: 243 GPAVLTNLATPVAGVYVTTSMARFGDAAIAGAAIVDRLVPVAFGTIFALTGAVGPILAQN 302

Query: 298 LGAKEITHIRQLVRIACQFVLGFQLLIALVTYVFATPLAELMTSETEVSQILNLHLVIVP 357
           LGA     +R  +R +   ++ + L + L  ++    +    ++E   + ++ L    V 
Sbjct: 303 LGAGRPDRVRATLRASLVLIVVWVLAVWLGLFLARDLVVGAFSAEGVSADLVRLFCTAVA 362

Query: 358 ISLGALGICMLMVSVANALGKSYVALTISALRLFAFYLPCLWLGAHFYGIEGLFIGALVG 417
                +G   +  +  N LG   +A   +  R     +P + +G    G  G+ IG   G
Sbjct: 363 GGFLFVGFLFVGNAAFNNLGFPLLATGFNWGRATLGTIPFVAVGGWLGGAPGVLIGQAAG 422

Query: 418 NIIAGWAAWL 427
           +++ G AA L
Sbjct: 423 SVLFGIAAVL 432