Pairwise Alignments

Query, 444 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., Staphylococcal virulence regulator protein A from Alteromonas macleodii MIT1002

 Score =  238 bits (608), Expect = 2e-67
 Identities = 148/442 (33%), Positives = 246/442 (55%), Gaps = 18/442 (4%)

Query: 14  LFQMTWPMLFGVLSLMSFQLVDSAFIGQLGVLPLAAQGFTMPIQMVIIGIQVGLGIATTA 73
           L +MT PM+ G++ +MSF L+D+ F+  LG  PLAA  FT P+   +I + +GLGI T+A
Sbjct: 22  LKRMTIPMILGMVMMMSFGLIDTFFVSLLGTDPLAAISFTFPVTFTVISLNIGLGIGTSA 81

Query: 74  VISRAIGAGKTEYAKQLGGLVIVIGGIGVALIALVLYLLRQPLLGLLGAPETVFAIIDHY 133
           +I +  G+ +   ++      +++  + V  +A + +   + +  LL A + +   I  Y
Sbjct: 82  IIGKLQGSKEITKSQHYATGSLMLSVLLVGALAAIGFFTIESVFKLLNATDNLMPYISDY 141

Query: 134 W-LWWLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNLILDPIFIFTFD----LG 188
             LW+L+S +  AM     SV RA G+T  P  +M     LN +LDPIFIF       +G
Sbjct: 142 MGLWYLSSIFL-AMPMVGNSVLRACGDTRTPSIVMAAGGGLNALLDPIFIFGLGPIPAMG 200

Query: 189 IDGAAIATIIAFGVG-------IAIVAPKVAQRQWTSYQWQDLNISQSLTALGHIMGPAM 241
           I GAA+AT IA+ VG       +A+    +  R  T  + +D   S+ +  +G    PA 
Sbjct: 201 IKGAALATFIAWIVGALWILYILAVRRKLMLPRLLTLAELRDS--SREILKIGL---PAA 255

Query: 242 LSQLLPPLSSMFATKLLASFGTAAVAAWALGSRFEFFALVAVLAMTMSLPPMIGRMLGAK 301
            + +L P++    T ++A +G  AVAAW +G+R E  A + VLA++M+LPP I + +GA 
Sbjct: 256 GANMLTPVAGGVMTAVVAGYGAEAVAAWGVGNRMESIASIVVLALSMTLPPFISQNVGAG 315

Query: 302 EITHIRQLVRIACQFVLGFQLLIALVTYVFATPLAELMTSETEVSQILNLHLVIVPISLG 361
           ++  ++    +  +FVL +Q  I LV +  ++ +A    +E EVS ++ L L+IVP+  G
Sbjct: 316 QVERVKTAYSLTLKFVLVWQFAIFLVMWGLSSWIAVAFANEAEVSVLIQLFLMIVPLGYG 375

Query: 362 ALGICMLMVSVANALGKSYVALTISALRLFAFYLPCLWLGAHFYGIEGLFIGALVGNIIA 421
             GI +L  S  NA+ +   ALT+S +RLF F++P    G+  + ++GLF G ++ NI  
Sbjct: 376 MQGIIILTNSSLNAMHRPMTALTLSVIRLFVFFVPISVAGSFLFELKGLFAGTVIANIAM 435

Query: 422 GWAAWLAYQKALRQLEGAHHTS 443
              +++ +++A+ Q E    TS
Sbjct: 436 ACVSFVVFKRAITQFESDKETS 457



 Score = 29.6 bits (65), Expect = 2e-04
 Identities = 40/210 (19%), Positives = 85/210 (40%), Gaps = 7/210 (3%)

Query: 231 TALGHIMGPAMLSQLLPPLSSMFATKLLASFGTAAVAAWALGSRFEFFALVAVLAMTMSL 290
           T L  +  P +L  ++     +  T  ++  GT  +AA +      F  +   + + +  
Sbjct: 20  TTLKRMTIPMILGMVMMMSFGLIDTFFVSLLGTDPLAAISFTFPVTFTVISLNIGLGIGT 79

Query: 291 PPMIGRMLGAKEITHIRQLVRIACQFVLGFQLLIALVTYVFATPLAELMTSETEVSQILN 350
             +IG++ G+KEIT  +     +    +     +A + +     + +L+ +   +   ++
Sbjct: 80  SAIIGKLQGSKEITKSQHYATGSLMLSVLLVGALAAIGFFTIESVFKLLNATDNLMPYIS 139

Query: 351 LHLVIVPISLGALGICMLMVSVANALGKSYVALTISAL--RLFAFYLPCLWLG---AHFY 405
            ++ +  +S   L + M+  SV  A G +     + A    L A   P    G       
Sbjct: 140 DYMGLWYLSSIFLAMPMVGNSVLRACGDTRTPSIVMAAGGGLNALLDPIFIFGLGPIPAM 199

Query: 406 GIEGLFIGALVGNIIAGWAAWLAYQKALRQ 435
           GI+G  +   +  I+   A W+ Y  A+R+
Sbjct: 200 GIKGAALATFIAWIVG--ALWILYILAVRR 227