Pairwise Alignments

Query, 444 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., Multidrug export protein MepA from Acinetobacter radioresistens SK82

 Score =  104 bits (259), Expect = 7e-27
 Identities = 88/391 (22%), Positives = 177/391 (45%), Gaps = 16/391 (4%)

Query: 34  VDSAFIGQL-GVLPLAAQGFTMPIQMVIIGIQVGLGIATTAVISRAIGAGKTEYAKQLGG 92
           +++ F+GQ+ GV  +AA     PI   ++   +GL    T ++ +A GA   +  + + G
Sbjct: 37  INTIFVGQMMGVEAIAAVSVFFPILFCLMAFVIGLSAGATVLVGQAWGAQNIQKVRCVVG 96

Query: 93  LVIVIGGIGVALIALVLYLLRQPLLGLLGAPETVFAIIDHYWLWWLASAWTGAMLYFYYS 152
             + +  IG  ++AL+  +  + +L  LG    V  +   Y  W LA +    +   Y S
Sbjct: 97  STLFMTLIGGIIVALLGVIFAEHILLALGTDPAVMHLSLPYVRWMLAGSPLLFIYIIYTS 156

Query: 153 VCRANGNTLLPGTLMMVTSVLNLILDPIFIFTF----DLGIDGAAIATIIAFGVGIAIVA 208
           + R  G+++ P   + +TS++ L++ PI I  +     +GI   AIATI+ +   +  +A
Sbjct: 157 ILRGVGDSVTPLIALGMTSLIGLMITPILIAGYFGLPKMGIIAPAIATIVGYLAVLGFLA 216

Query: 209 --------PKVAQRQWTSYQWQDLNISQSLTALGHIMGPAMLSQLLPPLSSMFATKLLAS 260
                   P    R+  SY      +S+ +  LG    P  +  +   ++ +    L+  
Sbjct: 217 VYLNKKHHPLRPDRELFSYIRHQPKLSKIILRLGI---PTGIQMVTTSVAGLVIVGLVNR 273

Query: 261 FGTAAVAAWALGSRFEFFALVAVLAMTMSLPPMIGRMLGAKEITHIRQLVRIACQFVLGF 320
           FG  A AA+   ++   +     L++ ++      + +GA +   + ++ R A       
Sbjct: 274 FGAHATAAYGAVNQVLNYIQFPALSIGIAASIFAAQAIGAGKNDLLSRVSRTALGMNFVI 333

Query: 321 QLLIALVTYVFATPLAELMTSETEVSQILNLHLVIVPISLGALGICMLMVSVANALGKSY 380
             ++ ++ Y+F+  L  L  ++ EV ++    L IV  S+   G   +  S+  A G   
Sbjct: 334 TGILVILGYLFSKYLMALFITDPEVVELGQQLLFIVLWSILFFGASAIFASIMRASGTVT 393

Query: 381 VALTISALRLFAFYLPCLWLGAHFYGIEGLF 411
           V + I+   + A  LPC +  +  +G++G++
Sbjct: 394 VPMLINIFAILAIELPCAYWFSQIWGLKGIW 424



 Score = 42.0 bits (97), Expect = 4e-08
 Identities = 47/208 (22%), Positives = 93/208 (44%), Gaps = 4/208 (1%)

Query: 10  LAKQLFQMTWPMLFGVLSLMSFQLVDSAFIGQLGVLPLAAQGFTMPIQMVIIGIQVGLGI 69
           L+K + ++  P    +++     LV    + + G    AA G    +   I    + +GI
Sbjct: 242 LSKIILRLGIPTGIQMVTTSVAGLVIVGLVNRFGAHATAAYGAVNQVLNYIQFPALSIGI 301

Query: 70  ATTAVISRAIGAGKTEYAKQLGGLVIVIGGIGVALIALVLYLLRQPLLGL-LGAPETVFA 128
           A +   ++AIGAGK +   ++    + +  +   ++ ++ YL  + L+ L +  PE V  
Sbjct: 302 AASIFAAQAIGAGKNDLLSRVSRTALGMNFVITGILVILGYLFSKYLMALFITDPEVVEL 361

Query: 129 IIDHYWLWWLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNLILDPIFIFTFDLG 188
                ++   +  + GA   F  S+ RA+G   +P  L+ + ++L + L   + F+   G
Sbjct: 362 GQQLLFIVLWSILFFGASAIF-ASIMRASGTVTVP-MLINIFAILAIELPCAYWFSQIWG 419

Query: 189 IDGAAIATIIAFGVGIAIVAPKVAQRQW 216
           + G   A  +AF V + I+     Q  W
Sbjct: 420 LKGIWYAYALAF-VSLCILQGLYYQFVW 446