Pairwise Alignments

Query, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  200 bits (509), Expect = 1e-55
 Identities = 125/350 (35%), Positives = 194/350 (55%), Gaps = 2/350 (0%)

Query: 167 ADRFFAGAGLPLMLVLTILMAYQFTRRLETLSQEARKVFDNPLMELVYNGRVDDLSEIQL 226
           A    AG GL ++ ++   +A    + +  L+  A+   D  L   + + R D+L  I  
Sbjct: 364 AGLLIAGIGLLVIWLVGHGIARPLKQMVAMLNDIAQGEGD--LTRRLTSDRADELGAIAN 421

Query: 227 AMKMRQSELNAVVGRIQDSSIQIGEAAKMSSQNSATTADNLDAQTRETEQLATAITQMNI 286
                  +L  ++ ++  S  ++ ++++ ++  +  T   +  Q  E +Q+ATA+ +M  
Sbjct: 422 GFNTFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTA 481

Query: 287 TATEIAHNAQAASDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTASSVIEQLSSQSAM 346
           TA ++A NA  A+ A  HA  AA  GM  V  T  +IG +A ++  A SV++ L+  S  
Sbjct: 482 TAQDVARNATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAKDSEN 541

Query: 347 IGQVMEVIQSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQRSTESTKEIQEV 406
           I  ++  I+ IAEQTNLLALNAAIEAARAG+QGRGFAVVADEVR LAQ++ ++T+EIQ +
Sbjct: 542 INAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTM 601

Query: 407 ITSIQTSTRNAVETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITMRNEQIATAIEEM 466
           I  +Q  TR+ V  +E     +   V +A  + + L  +   VS I   N QIA+A EE 
Sbjct: 602 IQQLQQGTRDVVRVMEDSQSRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAAEEQ 661

Query: 467 ANVTEDMNRSVQSISDVSTETLGLAENTQNECRQLAHNLAQQTSLVAQFR 516
           + V ED+NR+V +I  V+ E  G A+ +      L     QQ  L+ QF+
Sbjct: 662 SAVAEDINRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQFK 711