Pairwise Alignments

Query, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  202 bits (514), Expect = 3e-56
 Identities = 123/345 (35%), Positives = 199/345 (57%), Gaps = 4/345 (1%)

Query: 176 LPLMLVLTILMAYQFTRRLET----LSQEARKVFDNPLMELVYNGRVDDLSEIQLAMKMR 231
           L +  +LT+L A+  TR +        + A +V +  L   +     D+   +  AM   
Sbjct: 196 LVIATLLTLLFAWLLTRSITLPIAQALEAAEEVAEGNLTRPIKVDGSDEAGRLLAAMAKM 255

Query: 232 QSELNAVVGRIQDSSIQIGEAAKMSSQNSATTADNLDAQTRETEQLATAITQMNITATEI 291
           Q +L   + RI  S+ Q+  AA+  +  +  +A  L  Q  E EQ ATA+ +M     E+
Sbjct: 256 QDKLRDTLQRIAGSATQLASAAEELNAVTDESARGLTQQNNEIEQAATAVNEMTSAVEEV 315

Query: 292 AHNAQAASDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTASSVIEQLSSQSAMIGQVM 351
           A NA + S+A+ +A  +A DG   V++TV AI  M+  ++  +++I  L+++S  IG+V+
Sbjct: 316 ARNAVSTSEASRNATTSAGDGRDLVQETVSAIERMSGDVQATATLIGDLANESRDIGKVL 375

Query: 352 EVIQSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQRSTESTKEIQEVITSIQ 411
           +VI+ +A+QTNLLALNAAIEAARAG+ GRGFAVVADEVR LA R+ +ST EI+ +I SIQ
Sbjct: 376 DVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMIGSIQ 435

Query: 412 TSTRNAVETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITMRNEQIATAIEEMANVTE 471
             T +AV+++    + + S ++ A  +G  L  + + + +I  RN  IA+A EE A V  
Sbjct: 436 AGTEHAVDSMRNSTERAESTLNIAKGAGMSLDTINTAIVEINERNLVIASAAEEQAQVAR 495

Query: 472 DMNRSVQSISDVSTETLGLAENTQNECRQLAHNLAQQTSLVAQFR 516
           +++R++ +I D+S ++   A  T     +L+        +V +FR
Sbjct: 496 EVDRNLVNIRDLSVQSATGASQTSAASSELSRLAVDLNGMVGRFR 540