Pairwise Alignments

Query, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  348 bits (894), Expect = e-100
 Identities = 201/527 (38%), Positives = 305/527 (57%), Gaps = 16/527 (3%)

Query: 1   MRNNQPVTQKEVTYPPHFNLLSTTTLSSHIKYASKEFCDVAGYTLDELVNQPHNMVRHPD 60
           MRNNQPVTQ+E T+P    L+STT     I Y +  F +++G++ DELV  PHN+VRHPD
Sbjct: 1   MRNNQPVTQRERTFPAQQRLISTTDAKGVITYCNDAFVEISGFSRDELVRAPHNLVRHPD 60

Query: 61  MPPEAFKDMWEHLKAGKSWMGMVKNRCKNGDHYWVDAFASPIKENGKVVEYQSVRLCPSR 120
           +PP  F  MW  LK G  WMG+VKNRCK GDHYWV+A+ +P+ E  +VV Y+SVR+ P+ 
Sbjct: 61  VPPAVFAHMWSTLKQGLPWMGIVKNRCKTGDHYWVNAYVTPVFEGNQVVGYESVRIKPTA 120

Query: 121 QHVDNADKLYKEIKAGKTPWQLKMPRTRLWQRL---GLGFIVAAGVSFAADR-------F 170
           + +  A+ LY  I  GK+     +P+   W  +    L FI+ + +SF           F
Sbjct: 121 EQIRRAEALYHRINQGKSA----IPQRDKWLPVLQDWLPFILVSQLSFMIGASLNSHWGF 176

Query: 171 FAGAGLPLMLVLTILMAYQFTRRLETLSQEARKVFDNPLMELVYNGRVDDLSEIQLAMKM 230
              AGL + L L  L   Q  R L+ L + A +   +PL+  +Y       + +++++  
Sbjct: 177 ALAAGLSVPLGLLGLSWQQ--RGLKRLLRLAEQTTSDPLIAQMYTDSRGAQARLEMSILS 234

Query: 231 RQSELNAVVGRIQDSSIQIGEAAKMSSQNSATTADNLDAQTRETEQLATAITQMNITATE 290
           +++ L   + R+QD++  + + A  S+  +  ++  L+ Q  ETEQ+ATA+ QM  T  E
Sbjct: 235 QEARLKTCLTRLQDTAEHLNDQAAQSNTLAHNSSSGLERQRVETEQVATAVNQMAATTQE 294

Query: 291 IAHNAQAASDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTASSVIEQLSSQSAMIGQV 350
           +A + Q  +DAT  A      G     +T +AI  ++  +      + QL+  S  IG V
Sbjct: 295 VASHVQRTADATQEANRLTGRGRDIAGETREAIQRLSVAVGETGVTVTQLAKDSDEIGGV 354

Query: 351 MEVIQSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQRSTESTKEIQEVITSI 410
           ++VI+ IA+QTNLLALNAAIEAARAG+ GRGFAVVADEVR+LAQR+ EST +I  +I  +
Sbjct: 355 VDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTAESTGQIHALIAKL 414

Query: 411 QTSTRNAVETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITMRNEQIATAIEEMANVT 470
           Q +   AV+T++ G++ +   V     +   L  +   V+ IT    QIA A EE ++V 
Sbjct: 415 QQTAAAAVQTMDAGHRQAEEGVARVMEADQALVGISEAVAHITDMTTQIAAATEEQSSVA 474

Query: 471 EDMNRSVQSISDVSTETLGLAENTQNECRQLAHNLAQQTSLVAQFRR 517
           E+++R++ +I+ ++ +T   A N+     +L H    Q SLV +F R
Sbjct: 475 EEISRNISTIALLADQTSEQAMNSAQLSEELTHTANTQYSLVERFNR 521