Pairwise Alignments

Query, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  224 bits (572), Expect = 6e-63
 Identities = 134/344 (38%), Positives = 207/344 (60%), Gaps = 6/344 (1%)

Query: 178 LMLVLTILMAYQFTRRL-----ETLSQEARKVFDNPLMELVYNGRVDDLSEIQLAMKMRQ 232
           L L+  ++ A+  TR++     +TL Q A++V    L   + + R D+L ++Q AM+   
Sbjct: 295 LALIFGLVAAWAITRQIVIPLNQTL-QVAQRVASGDLSHNLTSMRQDELGQLQRAMQSMT 353

Query: 233 SELNAVVGRIQDSSIQIGEAAKMSSQNSATTADNLDAQTRETEQLATAITQMNITATEIA 292
             L  ++G I D   QI  AA+  S  +  T+  +++Q  ET+Q+ATA+ +M  T  E+A
Sbjct: 354 VGLRELIGGISDGVTQIASAAEQLSAVTEQTSAGVNSQKVETDQVATAMNEMAATVQEVA 413

Query: 293 HNAQAASDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTASSVIEQLSSQSAMIGQVME 352
            NA+ AS+A V A   AR+G   V + +  I  +A+++  ++  +  L  +S  IG V++
Sbjct: 414 RNAEEASEAAVAADQQAREGDKVVGEAIAQIERLATEVGNSTVAMGDLKRESDKIGSVLD 473

Query: 353 VIQSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQRSTESTKEIQEVITSIQT 412
           VI+S+A+QTNLLALNAAIEAARAG+ GRGFAVVADEVR LAQR+ +ST+EI+E+I  +Q+
Sbjct: 474 VIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEELIVGLQS 533

Query: 413 STRNAVETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITMRNEQIATAIEEMANVTED 472
            T+     ++    L+ S V+    +G  L ++   VS I   N QIATA E+ + V E+
Sbjct: 534 GTQQVATIMDNSRGLTDSSVELPRRAGSALASITRTVSTIQAMNSQIATAAEQQSAVAEE 593

Query: 473 MNRSVQSISDVSTETLGLAENTQNECRQLAHNLAQQTSLVAQFR 516
           +NRSV ++ DVS +T   +E T     +LA       +LV +FR
Sbjct: 594 INRSVLNVRDVSEQTAAASEETAASSTELARLGTHLQALVGRFR 637