Pairwise Alignments

Query, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  332 bits (852), Expect = 2e-95
 Identities = 191/525 (36%), Positives = 298/525 (56%), Gaps = 12/525 (2%)

Query: 1   MRNNQPVTQKEVTYPPHFNLLSTTTLSSHIKYASKEFCDVAGYTLDELVNQPHNMVRHPD 60
           MRNNQPVTQ+E++  P   L+S T +   I Y +  F D++G+   +L+  P N+VRHPD
Sbjct: 1   MRNNQPVTQREISLAPSQKLISATDVRGVITYCNDAFVDISGFERADLIGAPQNIVRHPD 60

Query: 61  MPPEAFKDMWEHLKAGKSWMGMVKNRCKNGDHYWVDAFASPIKENGKVVEYQSVRLCPSR 120
           +PP  F  MW  LK G  WMG+VKNR KNGDHYWV+A+ +PI +  KVV ++SVR+ P+ 
Sbjct: 61  VPPAVFAHMWGALKQGLPWMGIVKNRSKNGDHYWVNAYVTPIFDGSKVVGFESVRVKPTA 120

Query: 121 QHVDNADKLYKEIKAGKTPWQLKMPRTRLWQRLGLGFI--VAAGVSFAADRFFAGAGLPL 178
             +  A  LY+ I  GK      +PR   W    +  +  VA G++ +    F  A + +
Sbjct: 121 DEIRRAQALYRRISQGKPG----VPRQDAWLPAAINCVPYVATGLTGSLAGMFLSAPVAI 176

Query: 179 MLVLTILMAYQFT----RRLETLS--QEARKVFDNPLMELVYNGRVDDLSEIQLAMKMRQ 232
            + + + +         R+  TL           + L+  +Y+      + ++ A   + 
Sbjct: 177 AVAVAVAVPVGVLCSRWRQGSTLRLLHGVEPSTSDALIAQMYSDARGPQARLETAFLSQN 236

Query: 233 SELNAVVGRIQDSSIQIGEAAKMSSQNSATTADNLDAQTRETEQLATAITQMNITATEIA 292
           + L   + R+QDS+ Q+   A  S Q ++ ++  LD Q  ETEQ++ A+ QM  T  E+A
Sbjct: 237 ARLKTCLTRLQDSAEQLSALAGQSDQLASASSKGLDRQRVETEQVSAAVNQMAATTQEVA 296

Query: 293 HNAQAASDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTASSVIEQLSSQSAMIGQVME 352
            + Q  +DAT  A      G      T +AI  +++ +      + QL+  S  IG V++
Sbjct: 297 SHVQRTADATQQANVLTGRGREVARDTREAIERLSAVVSETGVTVAQLAKDSNEIGSVVD 356

Query: 353 VIQSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQRSTESTKEIQEVITSIQT 412
           VI+ IA+QTNLLALNAAIEAARAG+QGRGFAVVADEVR+LAQR+++ST +I  +IT +Q 
Sbjct: 357 VIKGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLAQRTSQSTTQIHGLITQLQA 416

Query: 413 STRNAVETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITMRNEQIATAIEEMANVTED 472
           S+ NAV+++E G + +   V     +   L  +   VS IT    QIA A EE + V E+
Sbjct: 417 SSNNAVQSMENGQRQAQEGVAWVLEADQALVGISEAVSHITDMTTQIAAATEEQSAVAEE 476

Query: 473 MNRSVQSISDVSTETLGLAENTQNECRQLAHNLAQQTSLVAQFRR 517
           ++R++ +I++++ +T   A  + +  ++L +  + Q +LV +F R
Sbjct: 477 ISRNITTIAELADQTSLQAHQSTDLSKELTNTASTQYALVERFNR 521