Pairwise Alignments

Query, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

 Score =  199 bits (505), Expect = 3e-55
 Identities = 124/346 (35%), Positives = 194/346 (56%), Gaps = 7/346 (2%)

Query: 174 AGLPLMLVLTILMAYQFTRRL----ETLSQEARKVFDNPLMELVYNGRVDDLSEIQLAMK 229
           AGL +  + ++++      R+    + +S  A  +     +EL  N   D+L +I  +  
Sbjct: 204 AGLIISFITSLVIITNLRSRVAYLKDRMSSAAANLSLRTRLELDGN---DELCDIGKSFN 260

Query: 230 MRQSELNAVVGRIQDSSIQIGEAAKMSSQNSATTADNLDAQTRETEQLATAITQMNITAT 289
               +++  +  + ++S ++   A   SQ +  T  N  +Q   T Q+ATAI ++  T +
Sbjct: 261 AFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHELGATVS 320

Query: 290 EIAHNAQAASDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTASSVIEQLSSQSAMIGQ 349
           EIA NA  A+D    A   + +G   V +  + I  + +++  A+ V+  L++Q   I  
Sbjct: 321 EIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLATQINGISS 380

Query: 350 VMEVIQSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQRSTESTKEIQEVITS 409
            ++ I+SI+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR LA RS  ST+EIQ+VI  
Sbjct: 381 TLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEEIQQVINR 440

Query: 410 IQTSTRNAVETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITMRNEQIATAIEEMANV 469
           +QT +  AVE +E+G   S   V+ +  +   LT + SQ+  I  +N Q+ATA EE + V
Sbjct: 441 LQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATEEQSTV 500

Query: 470 TEDMNRSVQSISDVSTETLGLAENTQNECRQLAHNLAQQTSLVAQF 515
            ED+NR+V+ I+ ++TET  +A+        L    +Q   LV  F
Sbjct: 501 VEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGSF 546