Pairwise Alignments

Query, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

 Score =  357 bits (917), Expect = e-103
 Identities = 198/521 (38%), Positives = 292/521 (56%), Gaps = 4/521 (0%)

Query: 1   MRNNQPVTQKEVTYPPHFNLLSTTTLSSHIKYASKEFCDVAGYTLDELVNQPHNMVRHPD 60
           MR N PVT+ E T+P    L+STT L S I Y +  F  ++G+T DELV QPHN+VRHPD
Sbjct: 1   MRMNLPVTEHERTFPGDQRLISTTDLDSRITYCNDAFVAISGFTYDELVGQPHNLVRHPD 60

Query: 61  MPPEAFKDMWEHLKAGKSWMGMVKNRCKNGDHYWVDAFASPIKENGKVVEYQSVRLCPSR 120
           MPP  F  MWE +K GK WMG+VKNR KNGD+YWV A+ + I E G++  Y+SVR  P+R
Sbjct: 61  MPPAVFGHMWETIKQGKPWMGIVKNRAKNGDYYWVSAYVTAIYEQGRISGYESVRSVPTR 120

Query: 121 QHVDNADKLYKEIKAGKTP--WQLKMPRT--RLWQRLGLGFIVAAGVSFAADRFFAGAGL 176
           + +  A+ LY  ++ G++P  W  ++       W  +G G + AAG  +          +
Sbjct: 121 EQIRRAEALYARLRDGRSPVPWAARLGHGLGHGWPLIGAGLLSAAGYLWLPPYAALAVLM 180

Query: 177 PLMLVLTILMAYQFTRRLETLSQEARKVFDNPLMELVYNGRVDDLSEIQLAMKMRQSELN 236
             +L+    + ++  + +     E  K F +PL+ L Y+       ++ LA+   ++ L 
Sbjct: 181 ASLLLAWYWVEHRQNQAIRRTLAEHPKAFTSPLVALTYSDNPGLKGQLDLAIISEEARLQ 240

Query: 237 AVVGRIQDSSIQIGEAAKMSSQNSATTADNLDAQTRETEQLATAITQMNITATEIAHNAQ 296
             + R+ D+ + +   A  SS  S   A  LD Q  ET+Q ATAI QM  T  ++ HN Q
Sbjct: 241 TALTRLVDAGVGVKSRAAQSSDLSDAQAQMLDRQRSETDQSATAIAQMAATIQQVTHNVQ 300

Query: 297 AASDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTASSVIEQLSSQSAMIGQVMEVIQS 356
           + + A   A   A+ G     +++  +G M+  +      +  L+ Q+  IG V++VI S
Sbjct: 301 STAHAASDADQLAQQGSELALKSLKDMGSMSDAVNDIGQAVNALAEQTQSIGSVVDVITS 360

Query: 357 IAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQRSTESTKEIQEVITSIQTSTRN 416
           IAEQTNLLALNAAIEAARAG+QGRGFAVVADEVR LAQR+  ST+EI  +I S++     
Sbjct: 361 IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTRASTEEIHHIIASLRAGAER 420

Query: 417 AVETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITMRNEQIATAIEEMANVTEDMNRS 476
           AV T  +G ++S   V +       L+ +   VS IT  ++Q+ATA E+ ++V ED+N+ 
Sbjct: 421 AVSTASRGEQISRDSVHSVEAVQAALSGIAVAVSRITGMSQQMATASEQQSHVAEDINQQ 480

Query: 477 VQSISDVSTETLGLAENTQNECRQLAHNLAQQTSLVAQFRR 517
           +  I+ +  ++ G A       + L        SL  +F R
Sbjct: 481 IVRIAQLCDQSAGQARQGAEISQDLERMAEYLHSLAERFNR 521