Pairwise Alignments

Query, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

 Score =  328 bits (841), Expect = 3e-94
 Identities = 189/521 (36%), Positives = 291/521 (55%), Gaps = 4/521 (0%)

Query: 1   MRNNQPVTQKEVTYPPHFNLLSTTTLSSHIKYASKEFCDVAGYTLDELVNQPHNMVRHPD 60
           MR N PVT  E  +PPH  L+S T  +S I Y + EF  ++GY+  EL+  PHN+VRHPD
Sbjct: 1   MRLNLPVTPVEQRFPPHQRLISATDTASLITYCNPEFAAISGYSEAELIGSPHNLVRHPD 60

Query: 61  MPPEAFKDMWEHLKAGKSWMGMVKNRCKNGDHYWVDAFASPIKENGKVVEYQSVRLCPSR 120
           MPP  ++ MW +LKAGKSWMG+VKNRC+NGD+YWV+A+ +PI E G+VV Y+SVR+CP+R
Sbjct: 61  MPPAVYELMWRYLKAGKSWMGIVKNRCRNGDYYWVNAYVTPILEGGRVVGYESVRVCPTR 120

Query: 121 QHVDNADKLYKEIKAGKTPWQLKMPRTRLWQRLGL---GFIVAAGVSFAADRFFA-GAGL 176
           + V  A+ LY  ++ G+         + L Q L L   G ++A G +         G  L
Sbjct: 121 EQVARAEALYARLRNGQAALSAPRRLSLLAQALALPLAGGLLAVGANHLWPGLVGQGLTL 180

Query: 177 PLMLVLTILMAYQFTRRLETLSQEARKVFDNPLMELVYNGRVDDLSEIQLAMKMRQSELN 236
            L +   + +     R+L+ + Q A   F +P+  L Y+       ++QL +   ++ L 
Sbjct: 181 GLFVACGLWVRNALGRQLQQIVQGAEGAFADPIAALTYSDLSGAAGQLQLMLISEEARLK 240

Query: 237 AVVGRIQDSSIQIGEAAKMSSQNSATTADNLDAQTRETEQLATAITQMNITATEIAHNAQ 296
             + R+ D + Q+  AA+ + Q S +T   L  Q  ET+  ATA+ QM  +  E+A++ Q
Sbjct: 241 TALTRLSDLAGQMAVAARDAGQLSRSTEAALLEQRAETDLSATAMNQMAASIGEVANHVQ 300

Query: 297 AASDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTASSVIEQLSSQSAMIGQVMEVIQS 356
             +     A   A  G    + +  AI  +AS +   +  +  L+ Q+  I +   +I+ 
Sbjct: 301 LTAAEAHTAHLLAEQGSQVADASGAAIRNLASTVTQINQAVSHLAGQTGAIAEAAGMIRG 360

Query: 357 IAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQRSTESTKEIQEVITSIQTSTRN 416
           IAEQTNLLALNAAIEAARAG+QGRGFAVVADEVR LA ++ +ST  IQ +I ++++    
Sbjct: 361 IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALADKTRQSTLHIQAIIDALRSGAEE 420

Query: 417 AVETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITMRNEQIATAIEEMANVTEDMNRS 476
           AV    +G   +   V     +   L  +   V  I+  ++Q+ATA ++ + V ED++R 
Sbjct: 421 AVAIASRGIDGAEQGVAQVQEARQALHGIRDAVQRISDMSQQMATASQQQSAVAEDVSRQ 480

Query: 477 VQSISDVSTETLGLAENTQNECRQLAHNLAQQTSLVAQFRR 517
           +  ++ ++  +   A    +   +L H  A   +LV +F R
Sbjct: 481 INGVAGIAQHSAHSANAAASRGTELEHVCAGLRALVERFNR 521