Pairwise Alignments

Query, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  208 bits (530), Expect = 3e-58
 Identities = 129/340 (37%), Positives = 194/340 (57%), Gaps = 4/340 (1%)

Query: 181 VLTILMAYQFTRRLETLSQEARK----VFDNPLMELVYNGRVDDLSEIQLAMKMRQSELN 236
           VLT   A+  TR +    +EA K    V D  L  ++     D+ + +  AM   Q +L 
Sbjct: 201 VLTFACAFLLTRSIVKPIEEALKCAEQVADGDLTHVIRAEGTDEAARLLRAMARMQDKLR 260

Query: 237 AVVGRIQDSSIQIGEAAKMSSQNSATTADNLDAQTRETEQLATAITQMNITATEIAHNAQ 296
             + +I  S+ Q+  AA+  +  +  +A  L  Q  E EQ ATA+T+M     E+A NA 
Sbjct: 261 DTLQQIAGSATQLASAAEELNAVTDESARGLQQQNNEIEQAATAVTEMTSAVEEVARNAV 320

Query: 297 AASDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTASSVIEQLSSQSAMIGQVMEVIQS 356
           + S+A+  A  +  DG   V +TV AI  M+  ++  + +I  L+ QS  IG+V++VI+ 
Sbjct: 321 STSEASSEASRSTGDGRDLVMETVGAIERMSGDVQATAKLITHLAEQSRDIGKVLDVIRG 380

Query: 357 IAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQRSTESTKEIQEVITSIQTSTRN 416
           +A+QTNLLALNAAIEAARAG+ GRGFAVVADEVR LA R+ +ST EI+ +I SIQ  T  
Sbjct: 381 LADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMIGSIQGGTEE 440

Query: 417 AVETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITMRNEQIATAIEEMANVTEDMNRS 476
           AVE++    + + S ++ A  +G  L  +   V+ I  RN  IA+A EE A V  +++R+
Sbjct: 441 AVESMRTSTERAESTLNIARGAGMALDTIAGAVAQINERNLVIASAAEEQAQVAREVDRN 500

Query: 477 VQSISDVSTETLGLAENTQNECRQLAHNLAQQTSLVAQFR 516
           + +I+D+S ++   A  T     +L+        LVA+FR
Sbjct: 501 LVNINDLSVQSATGAHQTSAASAELSRLAVDLNGLVARFR 540



 Score = 31.6 bits (70), Expect = 8e-05
 Identities = 61/265 (23%), Positives = 95/265 (35%), Gaps = 41/265 (15%)

Query: 263 TADNLDAQTRETEQLATAITQMNITATEIAHNAQAASDATVHAKNAARDGMHAVEQTVDA 322
           T D LD +  + ++   A   M + A E     QAA D      N  R     +E  +  
Sbjct: 84  TLDMLDQRNSQIDRARQAYLPMIVAADE-----QAAFDQYGQLLNQYRQ----LESRMRT 134

Query: 323 IGEMASQMKTASSVIEQLSSQSAMIGQVMEVIQSI-AEQTNLLALNAAIEAARAGDQGRG 381
           + +     +    +   L + S  I +VM+ +  I  +QT      AA + A A     G
Sbjct: 135 LSQADRLDELRDLLNRDLLANSEQINKVMDTLVRINTDQTRATNEKAANQYAGAFALVIG 194

Query: 382 FAVVADEV---------RKLAQRSTESTKEIQEVITSIQTSTRNAVETIEQGNKLSVSCV 432
             V A  +         R + +   E+ K  ++V     T    A  T E    L     
Sbjct: 195 LLVAATVLTFACAFLLTRSIVKPIEEALKCAEQVADGDLTHVIRAEGTDEAARLLRAMA- 253

Query: 433 DNAHLSGDKLTALLSQVSDITMRNEQIATAIEEMANVTEDMNRSVQSISDVSTETLGLAE 492
                  DKL   L Q++       Q+A+A EE+  VT++  R +Q              
Sbjct: 254 ----RMQDKLRDTLQQIAGSAT---QLASAAEELNAVTDESARGLQ-------------- 292

Query: 493 NTQNECRQLAHNLAQQTSLVAQFRR 517
              NE  Q A  + + TS V +  R
Sbjct: 293 QQNNEIEQAATAVTEMTSAVEEVAR 317