Pairwise Alignments

Query, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 514 a.a., Aerotaxis sensor receptor protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  275 bits (703), Expect = 3e-78
 Identities = 185/549 (33%), Positives = 281/549 (51%), Gaps = 68/549 (12%)

Query: 1   MRNNQPVTQKEVTYPPHFNLLSTTTLSSHIKYASKEFCDVAGYTLDELVNQPHNMVRHPD 60
           MR N PVTQ+E  +P +  L+STT   SHI YA+  F DV+G+TL+E+  QPHN+VRHPD
Sbjct: 1   MRVNSPVTQREYEFPDNATLMSTTDTQSHITYANAAFVDVSGFTLEEIQRQPHNLVRHPD 60

Query: 61  MPPEAFKDMWEHLKAGKSWMGMVKNRCKNGDHYWVDAFASPIKENGKVVEYQSVRLCPSR 120
           MP EAF DMW  LK G+ W  +VKNR KNGDHYWV A A+P+  NG+ V Y SVR   SR
Sbjct: 61  MPKEAFADMWATLKGGEPWTALVKNRRKNGDHYWVRANATPVIRNGQTVGYMSVRTKASR 120

Query: 121 QHVDNADKLYKEIKAGK--------------------TPWQLKMPRTRLWQRLGL----- 155
           + +  A++LY +++ G+                    T ++    R+R+   L L     
Sbjct: 121 EEIAGAERLYADMREGRAGHVKLHKGLLLRTGLMGLTTVFKTMGVRSRIRLPLALLLAGL 180

Query: 156 -GFIVAAGVSFAADRFFAGAGLPLMLVLTILMAYQFTRRLETLSQEARKVFDNPLMELVY 214
            G   A G+   A   FAG     +++    +  Q    LE L ++A +V      ++ +
Sbjct: 181 VGGARALGMEGLAWAEFAGLSAVGIVLAGWFLESQLAGPLEYLREQALRVATGDTQKVAH 240

Query: 215 NGRVDD-------LSEIQLAMKMRQSELNAVVGRIQDSSIQIGEAAKMSSQNSATTADNL 267
             RVD+       +S++ L  +    +++  V  +Q +  +I +     SQ +   A +L
Sbjct: 241 MDRVDEIGMTMRTISQLGLMFRWLIDDVSQQVLTVQTAVTEIAQGNNDLSQRTEQAASSL 300

Query: 268 DAQTRETEQLATAITQMNITATEIAHNAQAASDATVHAKNAARDGMHAVEQTVDAIGEMA 327
                  +Q A ++ QM  T  + A  +  A+  +  A  AA  G HAV Q V+ + E  
Sbjct: 301 -------QQTAASMEQMTATVRQNAETSSQANQLSGTASEAASRGGHAVSQVVNTMSE-- 351

Query: 328 SQMKTASSVIEQLSSQSAMIGQVMEVIQSIAEQTNLLALNAAIEAARAGDQGRGFAVVAD 387
                       ++  S  I  ++ VI  IA QTN+LALNAA+EAARAG+QGRGFAVVA 
Sbjct: 352 ------------ITESSRKISDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAG 399

Query: 388 EVRKLAQRSTESTKEIQEVITSIQTSTRNAVETIEQGNKLSVSCVDNAHLSGDKLTALLS 447
           EVR LAQRS E+ KEI+++I +       +   +E G +L    VD A  + D++   + 
Sbjct: 400 EVRSLAQRSAEAAKEIKQLIGA-------SAGKVEAGTRL----VDEAGKTMDEIVQQVR 448

Query: 448 QVSDITMRNEQIATAIEEMANVTEDMNRSVQSISDVSTETLGLAENTQNECRQLAHNLAQ 507
           +VSD+     +I+ A  E +   + ++++V  +  V+ +   L E      + L     +
Sbjct: 449 RVSDLI---SEISAATIEQSGGIQQVSQAVGHLDQVTQQNSALVEQGTAASQSLQQQTQR 505

Query: 508 QTSLVAQFR 516
               V+ FR
Sbjct: 506 LVEAVSVFR 514