Pairwise Alignments

Query, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 511 a.a., PAS domain-containing protein from Dickeya dianthicola ME23

 Score =  243 bits (619), Expect = 2e-68
 Identities = 173/508 (34%), Positives = 254/508 (50%), Gaps = 65/508 (12%)

Query: 1   MRNNQPVTQKEVTYPPHFNLLSTTTLSSHIKYASKEFCDVAGYTLDELVNQPHNMVRHPD 60
           MR N P+TQ+E     +  L+STT + SHI YA+  F  V+G+   EL+  PHN+VRHPD
Sbjct: 1   MRVNAPITQQEYLLDDNTTLMSTTDVKSHITYANSAFIRVSGFDEHELMGTPHNIVRHPD 60

Query: 61  MPPEAFKDMWEHLKAGKSWMGMVKNRCKNGDHYWVDAFASPIKENGKVVEYQSVRLCPSR 120
           MP EAF DMW  L+ G SW G+VKNR KNGDHYWV A  +P+  + ++  Y SVR  P  
Sbjct: 61  MPIEAFADMWYTLQQGDSWTGLVKNRRKNGDHYWVRANVTPVYHHNQLAGYISVRNTPKA 120

Query: 121 QHVDNADKLYKE----------------IKAGKTPWQLKMPRTRLWQRLGLGFIVAAGVS 164
           + +  A+ LY+                 ++ G         R  +  RL L  ++   V 
Sbjct: 121 EEIQAAEPLYEAVLSKQARHIRFYKGLVVRTGLFSVLSLFQRLSVRSRLRLAVLLGGLVP 180

Query: 165 FAADRFFAG------AGLPLMLVLTILMAYQFTRRLETLSQEARKVFDNPLMELVYNGRV 218
            A      G      A L LM+ L   +  Q    L  + ++A++V      + ++  RV
Sbjct: 181 LALILLGCGATTSIVATLLLMVTLDRFLQRQIAHPLRLILRQAQQVVSGRRADSIHINRV 240

Query: 219 DDLSEIQLAMKMRQSELNAVVGRIQDSSIQIGEAAKMSSQNSATTADNLDAQTRET---- 274
           DD+  +   +      L+++V    D   Q+     +S Q + +  D L A+T ET    
Sbjct: 241 DDIGLLLRVVNQFGLNLHSLV---DDVGTQVAGINSVSRQLADSNGD-LSARTEETSANL 296

Query: 275 EQLATAITQMNITATEIAHNAQAASDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTAS 334
           +Q A AI Q+ +    +  +A  A+ AT  A+NA+       +   +A+G M        
Sbjct: 297 QQTAAAIEQITVA---VQQSADTATQATQMAQNASLSASKGGDIMAEAVGMM-------- 345

Query: 335 SVIEQLSSQSAMIGQVMEVIQSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQ 394
              E +S+ S  I  ++ VI SIA QTN+LALNAA+EAARAG +GRGFAVVA EVR LAQ
Sbjct: 346 ---EAISNASRKIVDIIGVIDSIAFQTNILALNAAVEAARAGVEGRGFAVVAAEVRSLAQ 402

Query: 395 RSTESTKEIQEVITSIQTSTRNAVETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITM 454
            S  + +EI+ +I +  TS       +E G+ L    VD A L           + DI  
Sbjct: 403 HSASAAREIKTLIDANMTS-------VENGSAL----VDKAGL----------HIQDIVN 441

Query: 455 RNEQIATAIEEMANVTEDMNRSVQSISD 482
             +Q+A  I E++N T +   ++  I+D
Sbjct: 442 DVQQVAAMISEISNATHEQTAALSLIND 469