Pairwise Alignments

Query, 959 a.a., FAD-binding oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 936 a.a., 4Fe-4S ferredoxin from Pseudomonas simiae WCS417

 Score = 1006 bits (2600), Expect = 0.0
 Identities = 509/933 (54%), Positives = 659/933 (70%), Gaps = 13/933 (1%)

Query: 17  LASRIDPQRIITQEAKRLAYGTDASFYRLIPKIVLRLKSLDEVIFAIQSCGQLGIHFTFR 76
           +A  I   R        LA+GTDASFYRLIP++V+R++S DEV+  +Q   +  +  TFR
Sbjct: 11  VAQLIPKDRRFDDPLSTLAFGTDASFYRLIPQLVIRVESEDEVVALLQWAQRDHVAVTFR 70

Query: 77  AAGTSLSGQAVSDSVLITLTDDWRGHEVQNQGLKIRLQPGVIGADANKYLAPFQRKIGPD 136
           AAGTSLSGQA+SDSVLI L D+W G E++ QG +IRLQPGVIGA AN +LAPF RKIGPD
Sbjct: 71  AAGTSLSGQAISDSVLIVLGDNWNGREIRGQGTQIRLQPGVIGAQANAWLAPFGRKIGPD 130

Query: 137 PASINTCKIGGIAANNASGMCCGTAQNSYRTVDGMQIVFADGYVLDTRDPDSVARFKQER 196
           PASIN CKIGGI ANNASGMCCGTAQN+Y T+ G+++V ADG  LDT D  SV  F+++ 
Sbjct: 131 PASINACKIGGIVANNASGMCCGTAQNTYHTLAGIRLVLADGSRLDTEDATSVKAFREQH 190

Query: 197 ADLVEGIHALCQETLANSELTERIRHKYRLKNTTGYALNALVDFSDPIEVLTHLMIGSEG 256
             L+E +  L +ET AN+EL  +IRHKYRLKNTTG +LNALVDF +P+++L+HL++GSEG
Sbjct: 191 GALLERLATLGRETRANAELAAKIRHKYRLKNTTGLSLNALVDFDEPLDILSHLLVGSEG 250

Query: 257 TLGFIADITYHTVIEHAHKASALLVFADIEQASQAVTTLSKTPVAAVEMMDGRALRSVAD 316
           TLGFI+ +TY TV++H +KASAL+VF D+E    AVT L   PV+AVE++D R++RSV +
Sbjct: 251 TLGFISAVTYDTVVDHPNKASALIVFPDVETCCNAVTVLKTQPVSAVELLDRRSMRSVQN 310

Query: 317 KKGMPEFIAKLDLEAAALLIESHASDAQTLHAQCEQVMSALQRYHIIESVPFTSESKTVA 376
           K GMP F+ +L   A ALLIES A+ +  LH Q   +M++L ++ + + V FT +    A
Sbjct: 311 KPGMPAFVQQLSENACALLIESRAASSSLLHEQLALIMASLAQFPVEKQVDFTEDPTENA 370

Query: 377 TLWGIRKGMFPAVGAVREVGTTVIIEDVAFPVEKLAAGVRDLQALFDKYHYNEAIIFGHA 436
            LW IRK  FPAVGAVR+ GTTVIIEDV FPVE+LA GV  L  LFDK+HY+EAI+FGHA
Sbjct: 371 RLWAIRKDTFPAVGAVRKTGTTVIIEDVTFPVEQLAIGVNRLIELFDKHHYDEAILFGHA 430

Query: 437 LEGNLHFVFTQGFDKQSEIERYGAFMDDVAELVAVKYQGSLKAEHGTGRNMAPYVELEWG 496
           LEGNLHFVFTQGF+   E+ RY AFMDDVA+LVAV++ GSLKAEHGTGRNMAP+VELEWG
Sbjct: 431 LEGNLHFVFTQGFNSAEEVTRYQAFMDDVAQLVAVEFGGSLKAEHGTGRNMAPFVELEWG 490

Query: 497 KEGYALMQKIKALFDPNRLLNPGVIINEDKHSHISNLKPMPAADNLVDRCIECGFCEPVC 556
            + Y LM ++K L DPN +LNP V++++D   H+ +LKP+PAAD LVD+CIECGFCEPVC
Sbjct: 491 SDAYQLMWQLKRLLDPNGILNPDVVLSQDPQIHLKHLKPLPAADELVDKCIECGFCEPVC 550

Query: 557 PSRTLTLSPRQRIVLYRELQRRRAAGENVASSELEQVFEYQGLDTCAATGLCAERCPVGI 616
           PS+ LTLSPRQRIV++R++Q ++ AG  V +++LE  + YQG+DTCAATGLCA+RCPVGI
Sbjct: 551 PSKGLTLSPRQRIVIWRDIQAKKRAG--VDTTDLEAAYHYQGIDTCAATGLCAQRCPVGI 608

Query: 617 NTGDLVKKLRIAKYQKFTPIARWTAEHFSATTTLARGGLKANQLATQVLGEKSVDSMVNG 676
           NTGDLVKKLR     + T  A W A HFS     AR  L     A  +LG   +  +   
Sbjct: 609 NTGDLVKKLRSRDADR-TKTAEWLATHFSTALQGARFTLHVANGARMLLGAPRLAKLSAS 667

Query: 677 LRRISKGKTPLWMPEMPQANTHSLELAVENLPR---SDKKVVYLPSCASRNMGQQASATD 733
           + ++SKG+ P W   MPQ      E A+   P       +VVYL +C SR MG  A   +
Sbjct: 668 MTKLSKGQIPQWTAAMPQP-----EKAIRFSPAVTDERPRVVYLAACVSRAMGPAAGDKE 722

Query: 734 QRPLTEVTLSLLNKAGFEVILPAELSSQCCGMPYDSKGMTEIAQSKAQQLEHALWQASQE 793
           Q  L + T SLL KAG++V+ P    S CCG P+ SKG  E A+ K Q+L  AL  AS+ 
Sbjct: 723 QMSLYDKTRSLLEKAGYQVVFPDNQDSLCCGQPFASKGYAEQAEHKRQELIGALLHASRG 782

Query: 794 GRYPILMDTSPCAKRSIEQF-TKPMEILEPTGLVSRYLLDHLTLAPKQETIMLHITCSSR 852
           G  PI  DTSPC  R ++      +++ +P   +  +L+D L   P++  I +H+TCS++
Sbjct: 783 GLDPIYCDTSPCTLRLVQDLGDTRLDLYDPVRFIRTHLMDRLDFTPQEAPIAVHVTCSTQ 842

Query: 853 RLGLEGDMLKLAKACASEVIVPEHIQCCGWAGDKGFTTPELNAAAVHSLKEQVPAHCSRG 912
            LG    ++ LA+ C++ V++PE I CCG+AGDKGFTTPELNA ++ +LK+ V  +CS G
Sbjct: 843 HLGESQALIDLARRCSNTVVIPEGIHCCGFAGDKGFTTPELNAHSLRTLKDAV-QYCSEG 901

Query: 913 FSNSRTCEIGLSHHSGIPYQSILYLVDEVARPR 945
            S SRTCEIGLS H GI Y  ++YLVD V + R
Sbjct: 902 ISTSRTCEIGLSQHGGIDYHGLVYLVDRVTQAR 934