Pairwise Alignments

Query, 959 a.a., FAD-binding oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., glycolate oxidase, putative FAD-linked subunit from Pseudomonas putida KT2440

 Score =  143 bits (361), Expect = 2e-38
 Identities = 144/513 (28%), Positives = 214/513 (41%), Gaps = 70/513 (13%)

Query: 13  LEQILASRIDPQRIITQEAKRLAYGTDA-SFYRLIPKIVLRLKSLDEVIFAIQSCGQLGI 71
           L Q L   +    I+ ++     Y  D  S YR +P +V   + L++V   ++ C Q G+
Sbjct: 21  LLQALRDALPDLEILHRDEDLKPYECDGLSAYRTVPLLVALPERLEQVQTLLKLCHQRGV 80

Query: 72  HFTFRAAGTSLSGQAV--SDSVLITLTDDWRGHEVQNQGLKIRLQPGVIGADANKYLAPF 129
               R AGT LSG A+  +  +L+ +    R  EV  QG   R+QPGV     ++  AP 
Sbjct: 81  PVVARGAGTGLSGGALPLAKGILLVMARFNRILEVNPQGRYARVQPGVRNLAISQAAAPH 140

Query: 130 QRKIGPDPASINTCKIGGIAANNASGMCCGTAQNSYRTVDGMQIVFADGYVLDTRDPDSV 189
                PDP+S   C IGG  A NA G+ C     +   V  + I+  +G           
Sbjct: 141 GMYYAPDPSSQIACSIGGNVAENAGGVHCLKYGLTVHNVLKVDILTVEG----------- 189

Query: 190 ARFKQERADLVEGIHALCQETLANSELTERIRHKYRLKNTTGYALNALVDFSDPIEVLTH 249
                ER  L  G  AL                     ++ G+ L AL            
Sbjct: 190 -----ERLSL--GSDAL---------------------DSPGFDLLAL------------ 209

Query: 250 LMIGSEGTLGFIADITYHTVIEHAHKASALLVFADIEQASQAVTTLSKTPV--AAVEMMD 307
             IGSEG LG + ++T   + +       L  F  +E A +AV  +    +    +EMMD
Sbjct: 210 -FIGSEGMLGIVTEVTVKLLPKPQVARVILASFDSVEDAGRAVADIIAAGIIPGGLEMMD 268

Query: 308 GRALRSVADKKGMPEFI-AKLDLEAAALLIESHASDAQTLHAQCEQVMSALQRYHIIESV 366
             A+R+  D      FI A   ++AAA+L+         ++  CE+V + L +    E V
Sbjct: 269 NLAIRAAED------FIHAGYPVDAAAILLCELDGVEADVYDDCERVAAVLTQAGARE-V 321

Query: 367 PFTSESKTVATLWGIRKGMFPAVGAVREVGTTVIIEDVAFPVEKLAAGVRDLQALFDKYH 426
               +    A  W  RK  FPAVG    +       D   P  +L   ++ +  L  +Y 
Sbjct: 322 HLACDEAERARFWAGRKNAFPAVG---RISPDYYCMDGTIPRRELPRVLKGISDLSAEYG 378

Query: 427 YNEAIIFGHALEGNLHFVFTQGFDKQSEIERYGAFMDDVAELVAVKYQGSLKAEHGTGRN 486
              A +F HA +GN+H +     +   E+ER  A    + EL  VK  GS+  EHG GR 
Sbjct: 379 LRVANVF-HAGDGNMHPLILFDANLPGELERAEAIGGKILEL-CVKVGGSITGEHGVGRE 436

Query: 487 MAPYVELEWGKEGYALMQKIKALFDPNRLLNPG 519
               +  ++  +   L   +KA FDP  LLNPG
Sbjct: 437 KINQMCAQFNSDEITLFHAVKAAFDPQGLLNPG 469