Pairwise Alignments

Query, 959 a.a., FAD-binding oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 1008 a.a., putative protein from Pseudomonas sp. DMC3

 Score =  107 bits (266), Expect = 5e-27
 Identities = 166/701 (23%), Positives = 272/701 (38%), Gaps = 77/701 (10%)

Query: 6   ADSLYLQLEQILASRIDPQ---RIITQEAKRLAYGTDASFYRLIPKIV---LRLKSLDEV 59
           A +L    +Q LA+  D      I    A R+   TD S Y+ +P+     L  + +  V
Sbjct: 8   AKALTGDYQQFLAALKDSGFRGEISADYASRVVLATDNSIYQRLPQAAVFPLDAEDVARV 67

Query: 60  IFAIQSCGQLGIHFTFRAAGTSLSGQAVSDSVLITLTDDW-RGHEVQNQGLKIRLQPGVI 118
              I       +  T R  GT  +GQ+++D +++ L+    R  E+  +   +R+Q GV+
Sbjct: 68  ARLIAEPAYEKVVITPRGGGTGTNGQSLTDGIVVDLSRHMNRILEINVEQRWVRVQAGVV 127

Query: 119 GADANKYLAPFQRKIGPDPASINTCKIGGIAANNASGMCCGTAQNSYRTVDGMQIVFADG 178
               N  L        P+ ++ N   +GG+   +ASG    T   +   V  ++++   G
Sbjct: 128 KDQLNAALKCAGLFFAPELSTSNRATVGGMINTDASGQGSCTYGKTRDHVLELEMILRGG 187

Query: 179 YVLDTRD--PDSVARFKQERADLVEGIHALCQETLANSELTERIRHKYRLKNT--TGYAL 234
             L       D +A  +  R D V  ++   ++ +   E  E I+ ++   N   TGY L
Sbjct: 188 ERLRGLPLAEDELAA-QCARDDRVGEVYRCARQII--DEQGELIKARFPDLNRCLTGYDL 244

Query: 235 NALVDFSDPIEVLTHLMIGSEGTLGFIADITYHTVIEHAHKASALLVFADIEQASQAVTT 294
             L + +D    L  ++ G+EG+LGF+ +   + +    H     + +A    A +    
Sbjct: 245 AHLRE-ADQRFNLNSVLCGAEGSLGFVVEARLNVLPIPKHTMLVNIRYAGFMDALRDARA 303

Query: 295 LSKTPVAAVEMMDGRALRSVADK---KGMPEFIAKLDLEAAAL---LIESHASDAQTLHA 348
           L      ++E +D + L          G+ E+  + + E   L   L+E    D + L  
Sbjct: 304 LMALKPLSIETVDSKVLLLAMQDIVWHGVAEYFPE-NAERPTLGINLVEFCGDDPEDLQR 362

Query: 349 QCEQVMSALQRYHIIESVPFTSE--SKTVATLWGIRKGMFPAVGAVR-EVGTTVIIEDVA 405
           + E  +  LQ    +E +  T       V  ++G+RK     +G V  E      +ED A
Sbjct: 363 RVEAFLEHLQNDRTVERLGHTLAIGQAAVNKVYGMRKRAVGLLGNVAGEARPQPFVEDTA 422

Query: 406 FPVEKLAAGVRDLQALFDKYHYNEAIIFGHALEGNLHFVFTQGFDKQSEIERYGAFMDDV 465
            P + LA  + +L+ L D  H  +  +FGH   G LH           +        D V
Sbjct: 423 VPPQHLAEYIAELRDLLDS-HSLQYGMFGHVDAGVLHVRPILDMKDPQQAALVRPVSDGV 481

Query: 466 AELVAVKYQGSLKAEHGTGRNMAPYVELEWGKEGYALMQKIKALFDPNRLLNPGVIINED 525
           A L   +Y G L  EHG G   + Y    +G E Y  +Q +KA FDP    NPG I    
Sbjct: 482 AALTQ-RYGGLLWGEHGKGLR-SEYAPAFFG-ELYPALQALKAAFDPFNQFNPGKIATPA 538

Query: 526 KHS----HISNLKPMPAADNLVD-----------RCIECGFC------EPVCPS----RT 560
                   I  +      D  +D            C   G C      + +CPS    R 
Sbjct: 539 NSGAALLKIDEVTLRGELDRQIDEKVWQSYGAAMHCNGNGACYNFDPDDAMCPSWKATRE 598

Query: 561 LTLSPRQRIVLYRE-LQRRRAAGENVASSELEQVF----------------------EYQ 597
              SP+ R  L RE L+ +  AG +V S  + +                         Y 
Sbjct: 599 RAQSPKGRASLIREWLRLQGEAGVDVLSDAIRKPAFFSTLWQRWRNSRDPSADFSHEVYD 658

Query: 598 GLDTCAATGLCAERCPVGINTGDLVKKLRIAKYQKFTPIAR 638
            +  C A   CA +CPV +N  +   +     + ++   AR
Sbjct: 659 AMAGCLACKSCAGQCPVKVNVPEFRSRFLELYHSRYLRPAR 699