Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  192 bits (489), Expect = 6e-54
 Identities = 113/288 (39%), Positives = 159/288 (55%), Gaps = 4/288 (1%)

Query: 4   DDLILFYQVIELGSFSKVAEQNGLTNSVVSKRLARLEEELGVQLLYRTTRKLTLTEAGKA 63
           +D+ LF QV+E GSF+  AEQ GL+   VS+RL +LE+ LGV+LL R+TR+L +T  G++
Sbjct: 5   EDMRLFCQVMESGSFTAAAEQLGLSKQFVSRRLIQLEDRLGVRLLNRSTRRLDVTPLGQS 64

Query: 64  LLHGAKNVKQATQEALDAVVGFGENVSGHIKMSVPTISGDLILADAVAEFCNLHPGLTVD 123
               A  +    ++    + G      G I++S P       L   +  F   +P + V+
Sbjct: 65  YYESALRLLSEVEQVEQGIAGQNSEPRGTIRLSAPLSFAMAHLGCLLPLFLRRYPQVAVE 124

Query: 124 MSLDNRFVDLVEGGYDLVIRTGYLEDSSLIARHILDSQWVVCASPAYIARNGKPLKPEDL 183
           + L +R VDL+  GYDLV+R G LEDS+LIAR I     V CASP Y+A  G P KP+DL
Sbjct: 125 VDLSDRPVDLIGEGYDLVLRIGTLEDSTLIARRIASIPRVYCASPDYLALRGTPHKPDDL 184

Query: 184 ARHNCLQYAYQTTGATDWEFKGAKGNYIVKVSGTFSTDNATALRKAALGGHGIAYVPRCL 243
           A H+CL Y +       W FKG      + VSG    +N   LR  A+ G G+ Y+P  +
Sbjct: 185 AEHDCLPYGHGR--QVQWRFKGKV--QALNVSGRMRVNNGDLLRDTAIAGLGVTYLPTFI 240

Query: 244 VYHDFRNGELVDVFPEQVGKKLGIYAVYPFTRQPPNKVRLLIEHIRAR 291
           V    ++G LV V  E   + L + AVYP  RQ    V+ L+E +R R
Sbjct: 241 VGDALKDGRLVTVLDEFAPEALTLSAVYPQHRQGSRPVQALVEFLRER 288