Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  175 bits (443), Expect = 1e-48
 Identities = 99/282 (35%), Positives = 155/282 (54%), Gaps = 7/282 (2%)

Query: 9   FYQVIELGSFSKVAEQNGLTNSVVSKRLARLEEELGVQLLYRTTRKLTLTEAGKALLHGA 68
           F  V E   F+  AE+ G+++S +S+++ARLEE L  +LLYR+TRK+TLTEAG+  L   
Sbjct: 12  FVAVAECSQFTAAAERLGVSSSHISRQVARLEERLQTRLLYRSTRKVTLTEAGQTFLQHC 71

Query: 69  KNVKQATQEALDAVVGFGENVSGHIKMSVPTISGDLILADAVAEFCNLHPGLTVDMSLDN 128
           + ++   +EAL AV        G ++M+     G+  +   V  F  L+P L VD+ L N
Sbjct: 72  QRLQDGREEALRAVGDLTSEPKGMLRMTCAVAYGERFIVPLVTRFMGLYPQLRVDIELSN 131

Query: 129 RFVDLVEGGYDLVIRTGYLEDSSLIARHILDSQWVVCASPAYIARNGKPLKPEDLARHNC 188
           R +DLV  G DL IR G L+DS ++A  +   +  +CASP+Y+AR G+P    +L+RHNC
Sbjct: 132 RQLDLVHEGLDLAIRLGRLQDSRMVASRLAPRRMYLCASPSYLARYGRPHSLSELSRHNC 191

Query: 189 LQYAYQTTGATD-WEFKGAKGNYIVKVSGTFSTDNATALRKAALGGHGIAYVPRCLVYHD 247
           L       G++D W+       +  +V G +  ++  A+  AAL G G+  +P   V   
Sbjct: 192 L------IGSSDIWQLAQDGREFSQRVQGNWRCNSGQAVLDAALQGVGLCQLPDYYVLEH 245

Query: 248 FRNGELVDVFPEQVGKKLGIYAVYPFTRQPPNKVRLLIEHIR 289
             +G LV +          ++A+YP  R    KVR L++ ++
Sbjct: 246 LHSGALVSLLEAHQPPNTAVWALYPQQRHLSPKVRKLVDFLK 287