Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., Transcriptional regulator, LysR family from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  182 bits (463), Expect = 6e-51
 Identities = 107/287 (37%), Positives = 158/287 (55%), Gaps = 1/287 (0%)

Query: 2   RADDLILFYQVIELGSFSKVAEQNGLTNSVVSKRLARLEEELGVQLLYRTTRKLTLTEAG 61
           R + + +F  V++ GSF   ++   ++ + VS+ +A LE  LGV+LL RTTR+L+LT  G
Sbjct: 3   RFEAMRVFAAVVDAGSFVAASDALPMSKAAVSRHVAELESHLGVRLLNRTTRRLSLTPEG 62

Query: 62  KALLHGAKNVKQATQEALDAVVGFGENVSGHIKMSVPTISGDLILADAVAEFCNLHPGLT 121
           +      K V  +  EA   +       +G ++++ P   G L LA     F   HP LT
Sbjct: 63  EVFHARCKEVLASVDEAEAEITSRSGEATGLLRINAPFTFGLLHLAPLWVAFMASHPKLT 122

Query: 122 VDMSLDNRFVDLVEGGYDLVIRTGYLEDSSLIARHILDSQWVVCASPAYIARNGKPLKPE 181
           +D++L +R VDLVE G+D+ +R   L DSSL++R I  ++ V+CASP Y+ ++G P  P 
Sbjct: 123 LDVTLSDRVVDLVEEGFDMAVRIARLPDSSLVSRQIASTRLVLCASPGYLRQHGTPRHPA 182

Query: 182 DLARHNCLQYAYQTTGATDWEFKGAKGNYIVKVSGTFSTDNATALRKAALGGHGIAYVPR 241
           +LA H    Y+  + G   W F G +G   VKVS     +N    R AAL   GI   P 
Sbjct: 183 ELAHHQVAAYSLFSQG-DHWSFTGPQGPVTVKVSPRLRCNNGDTCRLAALRHQGIVLQPS 241

Query: 242 CLVYHDFRNGELVDVFPEQVGKKLGIYAVYPFTRQPPNKVRLLIEHI 288
            LV  D + G LV++ PE    +LG+Y VYP  +    KVRLLI+ +
Sbjct: 242 FLVGPDLQAGTLVELMPEFRSIELGVYVVYPSRKFVSPKVRLLIDFL 288