Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., HTH-type transcriptional regulator PgrR from Azospirillum sp. SherDot2

 Score =  205 bits (522), Expect = 9e-58
 Identities = 114/287 (39%), Positives = 168/287 (58%), Gaps = 1/287 (0%)

Query: 2   RADDLILFYQVIELGSFSKVAEQNGLTNSVVSKRLARLEEELGVQLLYRTTRKLTLTEAG 61
           R DDL +  +V++ GS S  AE+ GL+ S +S+R+A++E  LG +LL RTTR++ LT+AG
Sbjct: 3   RLDDLTVLVEVVDSGSLSAAAERLGLSASAISRRIAQMENRLGTRLLARTTRRIALTDAG 62

Query: 62  KALLHGAKNVKQATQEALDAVVGFGENVSGHIKMSVPTISGDLILADAVAEFCNLHPGLT 121
                 A+ +  A  EA  ++   GE   G +++++P + G + +A  +A +   +PG++
Sbjct: 63  ATFCLRARAILAALDEAEQSLTEMGEEPRGTLRITMPVLFGQMRVAPLLASYLRRYPGVS 122

Query: 122 VDMSLDNRFVDLVEGGYDLVIRTGYLEDSSLIARHILDSQWVVCASPAYIARNGKPLKPE 181
           +++SL++R   LVE G+DL IR G L DSSLIAR +   +  V ASP Y+ R G P  P 
Sbjct: 123 LEVSLNDRVQRLVEEGFDLAIRAGRLADSSLIARRLRPLRRHVVASPDYLERRGVPQSPA 182

Query: 182 DLARHNCLQYAYQTTGATDWEFKGAKGNYIVKVSGTFSTDNATALRKAALGGHGIAYVPR 241
           DL RH CL      +G T+WEF       I++ SG+F  D+   LR AA+GG G+A +  
Sbjct: 183 DLVRHECLT-LLSGSGRTEWEFMAGDRREILRPSGSFQADSLWLLRHAAVGGLGLARLAD 241

Query: 242 CLVYHDFRNGELVDVFPEQVGKKLGIYAVYPFTRQPPNKVRLLIEHI 288
            +V  D R G LV +  E       I+ VYP TR    KVR  IEH+
Sbjct: 242 FIVEEDIRAGRLVPLLSELEVTDEAIHVVYPATRHVSPKVRSFIEHL 288