Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., D-malate degradation protein R from Alteromonas macleodii MIT1002

 Score =  297 bits (761), Expect = 2e-85
 Identities = 144/298 (48%), Positives = 208/298 (69%)

Query: 2   RADDLILFYQVIELGSFSKVAEQNGLTNSVVSKRLARLEEELGVQLLYRTTRKLTLTEAG 61
           +ADD+ILF  V++ GSFSKVA++  LTNSVVSKR+ARLE +L VQLLYR+TRKL LT+AG
Sbjct: 3   KADDIILFVNVVDEGSFSKVAQKLNLTNSVVSKRIARLESDLNVQLLYRSTRKLNLTDAG 62

Query: 62  KALLHGAKNVKQATQEALDAVVGFGENVSGHIKMSVPTISGDLILADAVAEFCNLHPGLT 121
           + L + A+    A Q+A DAV G+ + V G I++++P +S  L+L  A+AEFCNLH  + 
Sbjct: 63  RTLYNKARIANLAIQDAEDAVSGYSDEVRGKIRITMPNVSAKLVLNRAIAEFCNLHEEVD 122

Query: 122 VDMSLDNRFVDLVEGGYDLVIRTGYLEDSSLIARHILDSQWVVCASPAYIARNGKPLKPE 181
           V++++ NR  +++E GYDL IRT +LEDSSLIA+ ++DS+W+VCASP Y+    +P  P+
Sbjct: 123 VELAITNRVTNIIEEGYDLAIRTAHLEDSSLIAKRLIDSKWIVCASPTYLKNKSRPNHPD 182

Query: 182 DLARHNCLQYAYQTTGATDWEFKGAKGNYIVKVSGTFSTDNATALRKAALGGHGIAYVPR 241
           DL  HNCL Y Y +TG   W F      + V++ G   ++N  ALR+AA+ G G+A++P+
Sbjct: 183 DLTEHNCLIYKYDSTGPDFWPFHIEGELHNVQIGGRIQSNNLDALRQAAIAGVGVAFLPK 242

Query: 242 CLVYHDFRNGELVDVFPEQVGKKLGIYAVYPFTRQPPNKVRLLIEHIRARYLAISHYF 299
            LV+ D  +G L  +  E V K +GIYAVYP +RQP  K++LL+ +++  +   S YF
Sbjct: 243 ALVHEDIEDGALSPLLVEYVTKTMGIYAVYPRSRQPDKKLKLLVNYLQEAFGNRSAYF 300