Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

 Score =  187 bits (476), Expect = 2e-52
 Identities = 108/289 (37%), Positives = 162/289 (56%), Gaps = 5/289 (1%)

Query: 5   DLILFYQVIELGSFSKVAEQNGLTNSVVSKRLARLEEELGVQLLYRTTRKLTLTEAGKAL 64
           DL +F  V   GS S  A++ G + +V+SKR+ RLEE+LG +L  RTTR+++LTEAG+  
Sbjct: 6   DLEVFASVAASGSMSLAAKELGYSPAVISKRIKRLEEKLGARLFQRTTRQISLTEAGQGF 65

Query: 65  LHGAKNVKQATQEALDAVVGFGENVSGHIKMSVPTISGDLILADAVAEFCNLHPGLTVDM 124
                 V    +EA D V G    V+G +K+S PT  G + +A  +  F   HP L+V++
Sbjct: 66  YERVLAVLAGLEEAEDFVSGRANTVNGTLKVSAPTSFGRMHIAPHLKGFMERHPDLSVNL 125

Query: 125 SLDNRFVDLVEGGYDLVIRTGYLEDSSLIARHILDSQWVVCASPAYIARNGKPLKPEDLA 184
            L + F+D++EGGYDL IR   L  SSL+AR +   + V+CAS  Y+  +G P   EDL 
Sbjct: 126 VLSDEFIDIIEGGYDLAIRIADLNSSSLVARRLAPVRRVLCASADYVVAHGMPATIEDLK 185

Query: 185 RHNCLQYAYQTTGATDWEFKGAKGNYIVKVSGTFSTDNATALRKAALGGHGIAYVPRCLV 244
           +H CL           W  +G  G   ++  G   T+++  +R+A + G GIA      +
Sbjct: 186 KHRCL----PAHNNDIWRLEGPGGALSIRPEGMLVTNSSEVIREAVISGLGIALRSTWDI 241

Query: 245 YHDFRNGELVDVFPEQVG-KKLGIYAVYPFTRQPPNKVRLLIEHIRARY 292
            H+ R+G+LV V P   G + + + AVYP  +  P KVRL I+++   Y
Sbjct: 242 GHELRSGKLVQVLPGYEGSRNVTLSAVYPSRQFLPAKVRLFIDYLAGLY 290