Pairwise Alignments

Query, 247 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 57.0 bits (136), Expect = 3e-13
 Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 8/192 (4%)

Query: 24  ADTLILTSLDWPPYSGEGLAEKGASIAVVKAAVEAMGHELVVEFYPWSRAVHLAKGEAKY 83
           A  L L +  WPP++   L   G +  +V  A+   G+    E  PW+RA+ +  G+ +Y
Sbjct: 22  AQRLRLVADAWPPFTDATLINGGLATDIVSTALARAGYASDFEQVPWARAL-MGVGDGRY 80

Query: 84  SGYFPEYFFEDNSLL--FSDSIGKGPLGFAENVANPIQWSVLEDLKPHTIGVVRDYINTP 141
                 ++ +  + L  FS       + F +   +PI++  LE L  + I VVR Y  + 
Sbjct: 81  DVLVNAWYDDARTQLGQFSGEYLLNRVRFIKRRDDPIEFQNLEQLHDYPIAVVRGYAYSA 140

Query: 142 ELDSMIAQGQLLSSAVNSDVQNLQKVAKGRVPLAVIDSNVFNYLKNNDPSLAADKDQLQM 201
             D      QL    V++    ++ +A  RV L V D  V  Y  + + +    ++ ++ 
Sbjct: 141 AFD---GDAQLQKVPVHNFAMAVRMLAAQRVRLTVEDEYVARYYLSRESTRV--RNTVEF 195

Query: 202 NKQLLVEKDLHI 213
             + L E  LHI
Sbjct: 196 LPKPLSENSLHI 207