Pairwise Alignments

Query, 247 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 69.7 bits (169), Expect = 5e-17
 Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 10/220 (4%)

Query: 19  AFSVKADTLILTSLDWPPYSGEGLAEKGASIAVVKAAVEAMGHELVVEFYPWSRAVHLAK 78
           +FS  A T+      WPP+  E   +KG S+ +V AA    G+ +     PWSRA++  K
Sbjct: 15  SFSAWAQTITAAQDPWPPFVMENAQQKGLSVDIVTAAFATQGYTVEFTIMPWSRALNDVK 74

Query: 79  GEAKYSGYFPEYFFEDNS--LLFSDSIGKGPLGFAENVANPIQWSVLEDLKPHTIGVVRD 136
            E K       +F ++ +  L +SD+     + F +   +  +++ L  L    +G+VR 
Sbjct: 75  -EGKIDILPATWFTQERTAYLTYSDNYLTNQVKFIKKAGDNFEFAGLASLNGKKVGIVRG 133

Query: 137 YINTPELDSMIAQGQLLSSAVNSDVQNLQKVAKGRVPLAVIDSNVFNYLKNNDPSLAADK 196
           Y      D  +              QNLQK+  GR+ LAV D  V   +        AD 
Sbjct: 134 Y---GYGDEFMNDPSFFRPESTDLKQNLQKLQAGRIDLAVEDELVAKSIITEAGMNLAD- 189

Query: 197 DQLQMNKQLLVEKDLHI-AFRNDAQGQKWQAIVNEGLKKI 235
                  Q + E  LH+ + + + + ++  A  N+GL +I
Sbjct: 190 --FAFTNQAISENPLHVTSGKANPRSEELVAAFNKGLAEI 227