Pairwise Alignments

Query, 247 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score = 61.6 bits (148), Expect = 1e-14
 Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 8/194 (4%)

Query: 22  VKADTLILTSLDWPPYSGEGLAEKGASIAVVKAAVEAMGHELVVEFYPWSRAVHLAKGEA 81
           V A  L L   +WPP++ + L   G +  +V  A+   G+    E  PW+RA+ L  GE 
Sbjct: 20  VAAQKLRLAFDNWPPFTDDALVNGGLATDIVSTALARAGYASGYEQVPWARAL-LGIGEG 78

Query: 82  KYSGYFPEYFFEDNSLL--FSDSIGKGPLGFAENVANPIQWSVLEDLKPHTIGVVRDYIN 139
           +Y      ++ ++ + +  FS       + F +    PI+++ LE L  + I VVR Y  
Sbjct: 79  RYDVLVNAWYNDERTQIGQFSGEYLINRIRFLKRKDAPIEYNSLEQLHTYPIAVVRGYAY 138

Query: 140 TPELDSMIAQGQLLSSAVNSDVQNLQKVAKGRVPLAVIDSNVFNYLKNNDPSLAADKDQL 199
           +   D+  A  ++    V++    ++ +A  RV L + D  V  Y    +   A  ++ +
Sbjct: 139 SAPFDADTAMQKV---PVHNFAMGVRMLAADRVKLTLEDEYVAKYYLARES--AKVRNSV 193

Query: 200 QMNKQLLVEKDLHI 213
           +   + L E  LHI
Sbjct: 194 EFLPKPLSENSLHI 207