Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  160 bits (404), Expect = 9e-44
 Identities = 97/296 (32%), Positives = 159/296 (53%), Gaps = 6/296 (2%)

Query: 1   MTQGINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATE 60
           + QGI +  TTLR ++  + +  +++   A++     E+  A ++ QK + + +A A  E
Sbjct: 346 LQQGIQRMGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGVNSQKIETDQVATAMHE 405

Query: 61  LNHSVATVAQTVNETAEQALNA---TRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKL 117
           +  +V  VA+   + +  A +A    R  D VV E   A + I  +  E+ R    M+ L
Sbjct: 406 MTATVQEVARNAEQASLAAADADGQARAGDKVVAE---AIAQIERLAAEVARSTDAMTHL 462

Query: 118 LIEGEKITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQST 177
             E  KI +V++VI  ++EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA +T +ST
Sbjct: 463 QQESNKIGSVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKST 522

Query: 178 EQIKANITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIH 237
           E+I+  +  L   T  V   +     L + + E    +  S+ N+  +V  I   + QI 
Sbjct: 523 EEIEGLVAGLQNGTQQVANVMNNSRSLTDSSVELTRKAGVSLENITRTVSNIQSMNQQIA 582

Query: 238 QSAAEQRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAKFR 293
            +A +Q    EEIS +IV   + +      + + A+ +  ++ + + + + ++ FR
Sbjct: 583 AAAEQQSAVAEEISRSIVNVRDVSEQTATASDETAKSSVELARLGSQLQQMVSHFR 638