Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  140 bits (354), Expect = 5e-38
 Identities = 89/276 (32%), Positives = 145/276 (52%), Gaps = 7/276 (2%)

Query: 12  LRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELNHSVATVAQT 71
           L   + EV +A+  LR  +      A +N  QI+ Q  + + +AAA T++  SV+ V+  
Sbjct: 263 LSDTISEVRSAAQALRHSSVTLLSVASDNRQQINLQTSEAQHVAAAITQMAASVSEVSGY 322

Query: 72  VNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEGEKITTVLNVI 131
            +  ++  + A    D+    +G  T  I  +   +      ++++  + E I TV+ VI
Sbjct: 323 ASAASKATILADAEVDSGHRLVGEVTVSIEELATILDHATLRVNQVSSDSENIETVIEVI 382

Query: 132 NDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQIKANITNLNRAT 191
           N I+ QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA +T +ST++I+  I  L   T
Sbjct: 383 NAIAAQTNLLALNAAIEAARAGEHGRGFAVVADEVRSLATRTQESTQEIRDMIGKLQSGT 442

Query: 192 NTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSAAEQRTAIEEIS 251
               + + R   L + T  +   SQ ++  +   V  I+  + QI   + +Q  A EE+ 
Sbjct: 443 QDAADIMQRSRSLAQTTVTQTRDSQLALGKISQEVGAINAMNAQIASVSVQQSAAAEEV- 501

Query: 252 LAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAE 287
                 ++    ++    Q+A G+++V   +  +AE
Sbjct: 502 ------AQNVTRIHSSTVQSAAGSEQVENSNHELAE 531