Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  162 bits (409), Expect = 2e-44
 Identities = 99/288 (34%), Positives = 158/288 (54%)

Query: 6   NQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELNHSV 65
           NQF + +  +V  + NASS+L+  A  +RE A        +Q+  +E ++ A  E+  + 
Sbjct: 359 NQFLSMIAQLVQRIGNASSDLQSAAADTREVAHNMNQAAGRQREAVELVSTAFNEMVATA 418

Query: 66  ATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEGEKIT 125
             VA++ +  A  A    R   +    IG AT  +  +  ++ R  Q M +L  + + I 
Sbjct: 419 NEVARSCSAAATSADEGYRDVHDGQQHIGEATGSVLKLSEDLQRSTQTMQQLEQDSKNIN 478

Query: 126 TVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQIKANIT 185
           T+L+ I  I+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR LA +T+ ST +I + + 
Sbjct: 479 TILDTIRSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALARRTADSTGEIDSLLG 538

Query: 186 NLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSAAEQRT 245
           NL R T  V +++     +   + E++  ++ S   ++ SV+ I +++ QI  +A EQ  
Sbjct: 539 NLARRTQEVTQQMQGSLLVSHTSVERIQQARDSFDKIRGSVDSIRDQNTQIATAAEEQHQ 598

Query: 246 AIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAKFR 293
             EEI+  I +    A  V   A     G+ R++ IS  +   + +F+
Sbjct: 599 VAEEINRHIAQIHADAQLVEGFAHSAQTGSGRLTDISGQLKGLVGRFK 646