Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  160 bits (406), Expect = 6e-44
 Identities = 98/288 (34%), Positives = 164/288 (56%)

Query: 6   NQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELNHSV 65
           N+F   L+ I+ EV  +  + R  A QS   A +  A ++QQ  Q++ +A A+ E++ + 
Sbjct: 427 NRFLDKLQPIIAEVKRSVQDARGTADQSAAIATQTSAGMEQQYRQVDQVATASHEMSATA 486

Query: 66  ATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEGEKIT 125
             VA++  + A+ A +A + T + +  I   T +I  + ++M     ++  L    EKI 
Sbjct: 487 QDVARSAAQAAQAARDADQATRDGLTVIEHTTHNIGALASDMSTAMTQVEGLAANSEKIG 546

Query: 126 TVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQIKANIT 185
           +VL VI  I+EQTNLLALNAAIEAARAGE GRGFAVVADEVRNLA +T +S E+ +  I 
Sbjct: 547 SVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQESVEETRLVIE 606

Query: 186 NLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSAAEQRT 245
           +L   T  V   +       + + E+V  + +++R +  +V +IS+ + QI  +A EQ  
Sbjct: 607 HLQNGTEAVVGSMGNSYRQAQGSVEQVGQAVTALRQIGDAVTVISDMNLQIASAAEEQSA 666

Query: 246 AIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAKFR 293
             EEI+  +    +   S+ ++A ++A  ++ +++++      M +FR
Sbjct: 667 VAEEINNNVATIRDVTESLSEQANESARVSQALNSLANQQQGLMDQFR 714