Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  141 bits (355), Expect = 5e-38
 Identities = 90/285 (31%), Positives = 153/285 (53%), Gaps = 6/285 (2%)

Query: 1   MTQGINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATE 60
           + QG N F   L+ I+  V + + ++    +Q +   E      + Q  +++++A AA E
Sbjct: 412 LAQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEE 471

Query: 61  LNHSVATV---AQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKL 117
           +  + A V   AQ     A  A  A +  D V+       + + +  N  V V +E+++ 
Sbjct: 472 MTQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELAR- 530

Query: 118 LIEGEKITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQST 177
                 I  +L+VI  ISEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +T  S 
Sbjct: 531 --NNTGIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASV 588

Query: 178 EQIKANITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIH 237
            +I++ I  +   T  V + +       + TAE+V+ + + +  V S++  I+E S QI 
Sbjct: 589 GEIRSVINKVELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIV 648

Query: 238 QSAAEQRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAIS 282
           Q+A +Q+T   +++ ++V   + +  +      + +  ++++ +S
Sbjct: 649 QAAQDQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQIARLS 693