Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  152 bits (385), Expect = 1e-41
 Identities = 98/291 (33%), Positives = 162/291 (55%), Gaps = 6/291 (2%)

Query: 5   INQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELNHS 64
           +N+  T+ + ++    ++ S L   A+++   A +    I +Q+ Q + IAAA  +   +
Sbjct: 307 VNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTAT 366

Query: 65  VATVAQTVN---ETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEG 121
           V  VAQ+     E +E+A  A      VV E  +    +SN   +M+   Q ++K   + 
Sbjct: 367 VHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLAAMQLLAK---DS 423

Query: 122 EKITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQIK 181
           E I +V++VI  ISEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA +T +ST+QI 
Sbjct: 424 EDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQESTKQIL 483

Query: 182 ANITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSAA 241
             +  L +++      + +      K  EK   + +++  + ++V+ IS  + QI  ++ 
Sbjct: 484 QTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQITANVDRISTMNTQIATASE 543

Query: 242 EQRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAKF 292
           EQ    EEI+  I+  SE +N     A Q++E T  ++ ++  + + +A++
Sbjct: 544 EQSAVTEEINKNIITISEISNQTALGAQQSSEATLELARLAESMQQEVARY 594