Pairwise Alignments
Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056
Subject, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056
Score = 140 bits (352), Expect = 9e-38
Identities = 87/286 (30%), Positives = 149/286 (52%), Gaps = 7/286 (2%)
Query: 1 MTQGINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATE 60
+ + N F L ++ ++ +++ + AQ+ ++ + ++D + + + AA TE
Sbjct: 271 VAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKVVAAVTE 330
Query: 61 LNHSVATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIE 120
++ + VA TA+ +A E+ A I + NE+ + + + L +
Sbjct: 331 MSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAVGDLSQQ 390
Query: 121 GEKITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQI 180
KIT VL VI DI+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +T ST++I
Sbjct: 391 AAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTKEI 450
Query: 181 KANITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSA 240
+ L++ + + + EKTA + + S+ + +V +I + Q +A
Sbjct: 451 GEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGIQTASAA 510
Query: 241 AEQRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIA 286
+Q E+I+ +V + N + +E K+ ++SA ++
Sbjct: 511 EQQSAVAEDINQNLVAIQQIVNEL-------SESFKQTESVSASLS 549
Score = 31.2 bits (69), Expect = 6e-05
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 18/136 (13%)
Query: 164 DEVRNLAVKTSQSTEQIKANITNLNRATNTVE---EELTRMTGL-----------LEKTA 209
DE+ ++A + +++ +T++ + NTVE +EL + T +K
Sbjct: 266 DEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKVV 325
Query: 210 EKVSHSQSSIR----NVKSSVEMISERSDQIHQSAAEQRTAIEEISLAIVEASEAANSVY 265
V+ ++ R N S+ + I + QI + E AI+ I + E ++ + +V
Sbjct: 326 AAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAVG 385
Query: 266 DRAAQNAEGTKRVSAI 281
D + Q A+ T+ + I
Sbjct: 386 DLSQQAAKITQVLKVI 401