Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  160 bits (404), Expect = 9e-44
 Identities = 98/297 (32%), Positives = 158/297 (53%), Gaps = 8/297 (2%)

Query: 1   MTQGINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATE 60
           + QGI +  TTLR ++  + +  +++   A++     E+  A  + QK + + +A A   
Sbjct: 346 LQQGIARMGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGANSQKVETDQVATAM-- 403

Query: 61  LNHSVATVAQTVNETAEQALNATRLTDNVVHE----IGSATSDISNMCNEMVRVNQEMSK 116
             H +A   Q V   AEQA +A    D+        +G A   I  +  +M R  + M+ 
Sbjct: 404 --HEMAATVQEVARNAEQASHAATGADDEARAGDRVVGEAIGQIERLAEDMHRSTEAMNL 461

Query: 117 LLIEGEKITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQS 176
           L  E +KI +V++VI  ++EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA +T +S
Sbjct: 462 LQQESQKIGSVMDVIKSVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKS 521

Query: 177 TEQIKANITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQI 236
           TE+I+  I +L   T  V   +     L + + E    + SS+ ++ S+V  I   + QI
Sbjct: 522 TEEIEELIASLQHGTQQVANAMQGSRALTDSSVELARKAGSSLESITSTVSSIQSMNQQI 581

Query: 237 HQSAAEQRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAKFR 293
             +A +Q    EEIS +I+   + +      + + A  +  ++ +   +   +++FR
Sbjct: 582 AAAAEQQSAVAEEISRSILNVRDVSEQTAAASDETAASSVELARLGGQLQTLVSQFR 638