Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

 Score =  139 bits (350), Expect = 1e-37
 Identities = 91/264 (34%), Positives = 147/264 (55%), Gaps = 6/264 (2%)

Query: 12  LRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELNHSVATVAQT 71
           ++T +  + +++  L  QA+QS   A ++   +++Q+ + E +AAA  ++  +   VA  
Sbjct: 239 MKTCLTRLQDSAEHLSDQARQSDALAHKSSTGLERQRVETEQVAAAVNQMAATTQEVANH 298

Query: 72  VNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEGEKITTVLNVI 131
           V  TA+    A RLT       G     I  +   +    Q +++L  + ++I  V++VI
Sbjct: 299 VQRTADATQEANRLTSQGRQIAGETREAIERLSAAVGETGQTVTQLAKDSDEIGGVVDVI 358

Query: 132 NDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQIKANITNLNR-A 190
             I++QTNLLALNAAIEAARAGE GRGFAVVADEVR LA +T++ST QI   I  L + A
Sbjct: 359 KGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTAESTGQIHGLIAKLQQTA 418

Query: 191 TNTVEEELTRMTG--LLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSAAEQRTAIE 248
           +N V   LT  TG    ++  ++V  +  ++  +  +V  I++ + QI  +  EQ    +
Sbjct: 419 SNAV---LTMETGHRQAQEGVDRVMQADEALVGISEAVANITDMATQIAAATEEQTAVAD 475

Query: 249 EISLAIVEASEAANSVYDRAAQNA 272
           EIS  I   +E A+   ++A  +A
Sbjct: 476 EISRNISTIAELADQTAEQAQHSA 499



 Score = 37.0 bits (84), Expect = 1e-06
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)

Query: 28  LQAQQSREKAEENVAQIDQQKHQL----ETIAAAATELNHSVATVAQTVNETAEQALNAT 83
           +QA ++     E VA I     Q+    E   A A E++ +++T+A+  ++TAEQA ++ 
Sbjct: 440 MQADEALVGISEAVANITDMATQIAAATEEQTAVADEISRNISTIAELADQTAEQAQHSA 499

Query: 84  RLTDNVVHEIGSATS 98
            L++ +    GS  S
Sbjct: 500 LLSEELTSTAGSQYS 514