Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 81.6 bits (200), Expect = 1e-20
 Identities = 63/238 (26%), Positives = 98/238 (41%), Gaps = 6/238 (2%)

Query: 6   ATLISVVLCSFSAWAQTITAAQDPWPPFVME-NAQQKGLSVDIVTAAFATQGYTVEFTIM 64
           ATL + +  S +A+ + +    +PW P+V + N   +GL  +     F   G  V++  +
Sbjct: 10  ATLFTCL--SLAAYGEKLRIVTEPWAPYVYDDNGTMRGLDYETTAIVFQRLGVEVQWQFL 67

Query: 65  PWSRALNDVKEGKIDILPATWFTQERTAYLTYSDNYLTNQVKFIKKAGDN-FEFAGLASL 123
           PW R L  + +G+ D     + + ER A L Y    L++    +  A +      GL  L
Sbjct: 68  PWKRCLAMLDQGQADGALDIFHSHERDALLLYPSEPLSDVEFVLFYANERPHPVQGLEDL 127

Query: 124 NGKKVGIVRGYGYGDEFMNDPSFFRPESTDLKQNLQKLQAGRIDLAVEDELVAKSIITEA 183
            G  VG   GY YG +F +   F    +   + N  KL  GRIDL + D  V + +I   
Sbjct: 128 RGLTVGTSPGYLYGADFSDSALFNHEPAPSHEANFGKLMLGRIDLVITDRRVGQHVIKAL 187

Query: 184 GMNLADFAFTNQAISENPLHVTSGKANPRSEELVAAFNKGLAEIKANGTFDKLLADYG 241
           G  L        A+        + +     + LV  F   L   K    +  L A YG
Sbjct: 188 G--LEGKVSQAPAVVSRQQQFLAVRRGAGMDLLVQRFAAELKRFKQEPAYSALSAKYG 243