Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  153 bits (386), Expect = 3e-42
 Identities = 81/236 (34%), Positives = 129/236 (54%), Gaps = 1/236 (0%)

Query: 8   LISVVLCSFSAWAQTITAAQDPWPPFVMENAQQKGLSVDIVTAAFATQGYTVEFTIMPWS 67
           LI V+L +  A+AQ +    D WPPF        GL+ DIV+ A A  GY  +F  +PW+
Sbjct: 10  LIGVLLLAQPAFAQRLRLVADAWPPFTDATLINGGLATDIVSTALARAGYASDFEQVPWA 69

Query: 68  RALNDVKEGKIDILPATWFTQERTAYLTYSDNYLTNQVKFIKKAGDNFEFAGLASLNGKK 127
           RAL  V +G+ D+L   W+   RT    +S  YL N+V+FIK+  D  EF  L  L+   
Sbjct: 70  RALMGVGDGRYDVLVNAWYDDARTQLGQFSGEYLLNRVRFIKRRDDPIEFQNLEQLHDYP 129

Query: 128 VGIVRGYGYGDEFMNDPSFFRPESTDLKQNLQKLQAGRIDLAVEDELVAKSIITEAGMNL 187
           + +VRGY Y   F  D    +    +    ++ L A R+ L VEDE VA+  ++     +
Sbjct: 130 IAVVRGYAYSAAFDGDAQLQKVPVHNFAMAVRMLAAQRVRLTVEDEYVARYYLSRESTRV 189

Query: 188 AD-FAFTNQAISENPLHVTSGKANPRSEELVAAFNKGLAEIKANGTFDKLLADYGI 242
            +   F  + +SEN LH+     NP   ++VA+F++ +A++KA+G++ +L+  +G+
Sbjct: 190 RNTVEFLPKPLSENSLHILVSLKNPEHAQIVASFDREIAKMKADGSYARLMKQHGM 245