Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., amino acid ABC transporter from Pseudomonas simiae WCS417

 Score = 57.8 bits (138), Expect = 2e-13
 Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 15/242 (6%)

Query: 8   LISVVLCSFSAWAQTIT---AAQDPWPPFVMENAQQK--GLSVDIVTAAFATQGYT-VEF 61
           L + V  +FSA A   T     +  +PPF  ++A     G   DI  A  A       E 
Sbjct: 9   LAAAVSMAFSATAMAETLKMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAKMKVEKCEV 68

Query: 62  TIMPWSRALNDVKEGKIDILPATW-FTQERTAYLTYSDNYLTNQVKFIK-KAGDNFEFAG 119
            +  W   +  +   K D L ++   T+ER A + ++D Y +N+++FI  KA  +F+   
Sbjct: 69  YVSDWDGIIPALNAKKFDFLVSSLSITEERKAAVDFTDPYYSNKLQFIAPKATADFK-TD 127

Query: 120 LASLNGKKVGIVRGYGYGDEFMNDPSFFRPESTDLKQNLQ-KLQAGRIDLAVEDELVAKS 178
            A L GK +G  R    G    +       +  D ++N    L +GR+D  + D+ V   
Sbjct: 128 AAYLKGKVIGAQRATLAGTYLEDKLPDTEAKLYDTQENAYLDLTSGRLDGILADKYVQYE 187

Query: 179 IITEAGMNLADFAFTNQAISENPLHVTSGKANPRSEELVAAFNKGLAEIKANGTFDKLLA 238
            +     +  +F   +  +  + + +   K +P  E L    NK LAEIKA+GT+ K+  
Sbjct: 188 WLKSKDGSAYEFK-GDPVVESDKIGIAVRKGDPLRERL----NKALAEIKADGTYKKIND 242

Query: 239 DY 240
            Y
Sbjct: 243 KY 244