Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., Periplasmic amino acid-binding protein-related protein from Pseudomonas putida KT2440

 Score = 55.8 bits (133), Expect = 8e-13
 Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 11/194 (5%)

Query: 30  WPPFVMENAQQ-KGLSVDIVTAAFATQGYTVEFTIM-PWSRALNDVKEGKIDILPATWFT 87
           +PP    +  Q +GL+  +V   FA  GY V+  ++  W R L D   G++D++ A + +
Sbjct: 33  YPPISWSDGHQVRGLAPTVVRELFARMGYEVQTVVLGNWKRCLMDAAAGRVDVVLA-YNS 91

Query: 88  QERTAYLTYS-DNYLTNQVKFIKKAGDNFEFAGLASLNGKKVGIVRGYGYGDEFMNDPSF 146
            +R   + +S +  +  +V          +F  L  L G + G++ G  YG EF  D   
Sbjct: 92  DQRDQRMRFSTEPVMREEVAVFYNRKRPVQFQQLEDLAGYRGGLLYGESYGAEF--DRFV 149

Query: 147 FRPES----TDLKQNLQKLQAGRIDLAVEDELVAKSIITEAGMNLADFAFTNQAISENPL 202
            R ++    +  +QN  KL  GRID  +++       I E      D      A+S + L
Sbjct: 150 ARHQNIERVSSSQQNFGKLIRGRIDYVIQERRTGLLFI-EHLPGAQDIRALPTALSVDYL 208

Query: 203 HVTSGKANPRSEEL 216
            V   + +P S+ +
Sbjct: 209 RVAVSRQSPLSQHM 222