Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score = 62.8 bits (151), Expect = 9e-15
 Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 18/242 (7%)

Query: 8   LISVVLCSFSAWAQTITAAQDPWPPFVMENAQQKGLSVDIVTAAFATQGYTVEFTIMPWS 67
           L+S++LC  +   +          P+V+   + +G+  DI  +A A +G+ ++   +P  
Sbjct: 106 LLSLLLCLPAEAREVTVGVGLSLSPYVIPE-ELRGMEYDIAKSALALEGHEMKPVFLPLG 164

Query: 68  RALNDVKEGKIDILPATWFTQERTAYLT---YSDNYLTNQVKFIKKAGDNFEFAGLASLN 124
           R    +  G++D         +R   LT   YSD Y+  +   I  A        L  L+
Sbjct: 165 RVAKALDGGQMDAAMT-----QRPGTLTGLVYSDIYIVYRNYAITLASRQLNVDRLEDLS 219

Query: 125 GKKV-GIVRGYGY-GDEFMNDPSF---FRPESTDLKQNLQKLQAGRIDLAVEDELVAKSI 179
           GK V    R   Y G EF         +R E+  L Q L  L  GR+D+ V D  +    
Sbjct: 220 GKSVLAFQRATSYLGPEFKKVAEANQAYREEANQLIQPLL-LYKGRVDVVVADRNIFDWF 278

Query: 180 ITEAGMNLADFAFTNQAISENPLHV-TSGKANPRSEELVAAFNKGLAEIKANGTFDKLLA 238
             +    + D A  +Q ++ +PL   T  +   R   L  AFN+GLA ++A G +D+++A
Sbjct: 279 ANQP--EVRDKADISQPVTYHPLFPPTEYRVAFRDVALRDAFNRGLARLRAEGEYDRIIA 336

Query: 239 DY 240
            Y
Sbjct: 337 RY 338