Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 63.2 bits (152), Expect = 5e-15
 Identities = 60/244 (24%), Positives = 108/244 (44%), Gaps = 17/244 (6%)

Query: 9   ISVVLCSFSAWAQTITAAQDP-WPPFVMENAQQK--GLSVDIVTAAFATQGYTVEFTIMP 65
           +     S++A  QT+    D  + PF  ++A+ +  G  +D+             +    
Sbjct: 14  LGATAASYAALPQTVRIGTDTTYAPFSSKDAKGEFIGFDIDLGNEMCKRMQVKCTWVASD 73

Query: 66  WSRALNDVKEGKID-ILPATWFTQERTAYLTYSDNYLTNQVKFIKKAGDNFEFAGLASLN 124
           +   +  +K  KID I+ +   T +R   + +SD       + I   G   +   L SL 
Sbjct: 74  FDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAKGSPIQ-PTLESLK 132

Query: 125 GKKVGIVRGYGYGDEFMNDPSFFRPESTDL----KQNL--QKLQAGRIDLAVEDELVAKS 178
           GK VG+++G    + + ND   +R +  D+     Q+L    L AGR+D A++DE+ A  
Sbjct: 133 GKHVGVLQG-STQEAYANDN--WRTKGVDVVAYANQDLIYSDLTAGRLDAALQDEVAASE 189

Query: 179 IITEAGMNLADFAFTNQAISENPLHVTSGKANPRSE--ELVAAFNKGLAEIKANGTFDKL 236
              +      ++AF   ++ +            R +  EL AAF+K L E++ +GT+DK+
Sbjct: 190 GFLKQPAG-KEYAFAGPSVKDKKYFGDGTGVGLRKDDTELKAAFDKALTELRQDGTYDKM 248

Query: 237 LADY 240
              Y
Sbjct: 249 AKKY 252