Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., lysine-arginine-ornithine-binding periplasmic protein from Enterobacter asburiae PDN3

 Score = 70.9 bits (172), Expect = 2e-17
 Identities = 74/256 (28%), Positives = 120/256 (46%), Gaps = 21/256 (8%)

Query: 2   MKSIATLISVVLC------SFSAWAQTITAAQDP-WPPFVMENAQQKGLSVDIVTAAFAT 54
           MK +   +S+VL       +F+A  Q I    DP + PF  +N++ + +  DI  A    
Sbjct: 1   MKKLVLSLSLVLAFSSATAAFAAIPQKIRIGTDPTYAPFESKNSKGELVGFDIDLANELC 60

Query: 55  QGYTVEFTIM--PWSRALNDVKEGKIDILPATW-FTQERTAYLTYSDN-YLTNQVKFIKK 110
           +    + T +  P    +  +K  KID++ ++   T++R   + ++D  Y  +    + K
Sbjct: 61  KRIKAQCTYVENPLDALIPSLKAKKIDVIMSSLSITEKRQQEIAFTDKLYAADSRLVVAK 120

Query: 111 AGDNFEFAGLASLNGKKVGIVRGYG---YGDEFMNDPSFFRPESTDLKQNLQK-LQAGRI 166
           A D      L SL GK+VG+++G     YG+E    P      S   ++N+   L AGRI
Sbjct: 121 ASDIQPT--LESLKGKRVGVLQGTTQETYGNEHWA-PKGIEIVSYQGQENIYADLTAGRI 177

Query: 167 DLAVEDELVAKSIITEAGMNLADFAFTNQAISENPLHVTSGKANPRSE--ELVAAFNKGL 224
           D A +DE+ A     +  +   D+ F   +I +  L         R E  EL  A NK  
Sbjct: 178 DAAFQDEVAASEGFLKTPVG-KDYKFGGPSIKDVKLFGVGTGMGLRKEDNELREALNKAF 236

Query: 225 AEIKANGTFDKLLADY 240
           AE++A+GT+DKL   Y
Sbjct: 237 AEMRADGTYDKLAKKY 252