Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., lysine-arginine-ornithine-binding periplasmic protein from Enterobacter asburiae PDN3

 Score = 61.6 bits (148), Expect = 1e-14
 Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 23/252 (9%)

Query: 4   SIATLISVVLCSFSAWAQTITAAQDP-WPPFVMENAQQKGLSVDIVTAAFATQGYTVEFT 62
           S+   +S    S++A  QT+    D  + PF  ++A+   +  DI       +   V+ T
Sbjct: 9   SLLVGLSAAAGSYAALPQTVRIGTDATYAPFSSKDAKGDFVGFDIDLGNEMCKRIAVKCT 68

Query: 63  IM--PWSRALNDVKEGKID-ILPATWFTQERTAYLTYSDNYLTNQVKFIKKAGDNFEFAG 119
            +   +   +  +K  KID I+ +   T++R   + +SD       + I   G   +   
Sbjct: 69  WVGSDFDALIPSLKAKKIDAIISSLSITEKRQQEIAFSDKLYAADSRLIAPKGSPIK-PT 127

Query: 120 LASLNGKKVGIVRGY---GYGDEFMNDPSFFRPESTDL----KQNL--QKLQAGRIDLAV 170
           + SL GK VG+++G    GY +      + +R +  D+     Q+L    L AGR+D A 
Sbjct: 128 IDSLKGKHVGVLQGSTQEGYAN------ATWREKGVDVVAYQNQDLIYSDLAAGRLDAAF 181

Query: 171 EDELVAKSIITEAGMNLADFAFTNQAISENPLHVTSGKANPRSE--ELVAAFNKGLAEIK 228
           +DE+ A     +      D+AF   ++ +            R +  EL AAF+K  AE++
Sbjct: 182 QDEVAASEGFLKQPAG-KDYAFAGPSVKDKKYFGDGTGIGLRKDDTELKAAFDKAFAELR 240

Query: 229 ANGTFDKLLADY 240
            +GT+DKL   Y
Sbjct: 241 KDGTYDKLAKKY 252