Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT from Escherichia coli ECRC62

 Score = 68.2 bits (165), Expect = 2e-16
 Identities = 67/257 (26%), Positives = 113/257 (43%), Gaps = 22/257 (8%)

Query: 1   MMKSIATL-----ISVVLCSFSAWAQTITAAQDP-WPPFVMENAQQK--GLSVDIVTAAF 52
           M KSI  L     +S    S++A  +T+    D  + PF  ++A+    G  +D+     
Sbjct: 1   MKKSILALSLLVGLSAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC 60

Query: 53  ATQGYTVEFTIMPWSRALNDVKEGKID-ILPATWFTQERTAYLTYSDNYLTNQVKFIKKA 111
                   +    +   +  +K  KID I+ +   T +R   + +SD       + I   
Sbjct: 61  KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK 120

Query: 112 GDNFEFAGLASLNGKKVGIVRGYGYGDEFMNDPSFFRPESTDL----KQNL--QKLQAGR 165
           G   +   L SL GK VG+++G    + + N+   +R +  D+     Q+L    L AGR
Sbjct: 121 GSPIQ-PTLDSLKGKHVGVLQG-STQEAYANET--WRSKGVDVVAYANQDLVYSDLAAGR 176

Query: 166 IDLAVEDELVAKSIITEAGMNLADFAFTNQAISENPLHVTSGKANPRSE--ELVAAFNKG 223
           +D A++DE+ A     +      DFAF   ++ +            R +  EL AAFNK 
Sbjct: 177 LDAALQDEVAASEGFLKQPAG-KDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKA 235

Query: 224 LAEIKANGTFDKLLADY 240
           L E++ +GT+DK+   Y
Sbjct: 236 LGELRQDGTYDKMAKKY 252