Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., histidine ABC transporter substrate-binding protein HisJ from Escherichia coli ECRC101

 Score = 68.9 bits (167), Expect = 9e-17
 Identities = 68/255 (26%), Positives = 116/255 (45%), Gaps = 19/255 (7%)

Query: 2   MKSIATLISVVLC------SFSAWAQTITAAQDP-WPPFVMENAQQKGLSVDIVTAAFAT 54
           MK +   +S+VL       +F+A  Q I    DP + PF  +N+Q + +  DI  A    
Sbjct: 1   MKKLVLSLSLVLAFSSATAAFAAIPQNIRIGTDPTYAPFESKNSQGELVGFDIDLAKELC 60

Query: 55  QGYTVEFTIM--PWSRALNDVKEGKID-ILPATWFTQERTAYLTYSDNYLTNQVKFIKKA 111
           +    + T +  P    +  +K  KID I+ +   T++R   + ++D       + +   
Sbjct: 61  KRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQEIAFTDKLYAADSRLVVAK 120

Query: 112 GDNFEFAGLASLNGKKVGIVRGYGYGDEFMND---PSFFRPESTDLKQNLQK-LQAGRID 167
             + +   + SL GK+VG+++G    + F N+   P      S   + N+   L AGRID
Sbjct: 121 NSDIQ-PTVESLKGKRVGVLQGTTQ-ETFGNEHWAPKGIEIVSYQGQDNIYSDLTAGRID 178

Query: 168 LAVEDELVAKSIITEAGMNLADFAFTNQAISENPLHVTSGKANPRSE--ELVAAFNKGLA 225
            A +DE+ A     +  +   D+ F   ++ +  L         R E  EL  A NK  A
Sbjct: 179 AAFQDEVAASEGFLKQPVG-KDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKAFA 237

Query: 226 EIKANGTFDKLLADY 240
           E++A+GT++KL   Y
Sbjct: 238 EMRADGTYEKLAKKY 252