Pairwise Alignments

Query, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 523 a.a., microcin ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  509 bits (1311), Expect = e-148
 Identities = 267/526 (50%), Positives = 383/526 (72%), Gaps = 10/526 (1%)

Query: 6   LLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNAR 65
           L+++R+LSV+F+        V+N+S D+RPGE LA+VGESGSGKSV+ ++++QLLP+ A 
Sbjct: 3   LIEIRDLSVAFSGQT----VVRNLSLDVRPGECLALVGESGSGKSVTAHSILQLLPE-AG 57

Query: 66  IHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCHRN 125
                SI + G+EL+  +   ++++RG+RI MIFQEPMTSLNP   +  Q+ E +  H+ 
Sbjct: 58  TETTGSIQYRGQELIGASAATLQKLRGNRIAMIFQEPMTSLNPLHSIEKQIGETLLLHKG 117

Query: 126 VSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILIADEPT 185
           +    A+ R+LEL  LV +  P+   + +PH+ SGGQ QR+MIAMAL  EP++LIADEPT
Sbjct: 118 LGGKAAQARILELLDLVGIQKPQERLKAYPHQLSGGQRQRVMIAMALACEPELLIADEPT 177

Query: 186 TALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQGSTEQL 245
           TALDVTVQ ++L L+K +Q  +GM++L I+HDL +V+ +A RV VM  G++VEQ   + L
Sbjct: 178 TALDVTVQRKILLLLKSLQKRLGMSLLLISHDLNLVRSIAQRVCVMRAGEIVEQADCQTL 237

Query: 246 FLQPEHDYTRMLINSIPKGSKDPVAVD-AAPLLKAEDIRVKFLVKPYFISRRNQYFEAVK 304
           F  P+H Y+R+L+++ P    D +  D    +L+ +D+ V+F +    + RR  Y  AV 
Sbjct: 238 FNAPQHPYSRLLLDAEP--DADALCSDERETVLQVDDLTVQFRLGG-GLFRRKTYLRAVD 294

Query: 305 GISLELKQGETLGIVGESGSGKSTLGRALIGLLPSTGQIAFKGQDFRALSEKQRLALKKD 364
           GISL +++G+TLGIVGESGSGKSTLG+A++ LL STG I F+G+    L+ +Q    +K 
Sbjct: 295 GISLSVQRGKTLGIVGESGSGKSTLGQAILRLLDSTGSIRFQGEALDPLNNQQMRPWRKQ 354

Query: 365 IQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRALEEVRLDPNSINRYP 424
           +Q+VFQDPYGSLSPRMTV +II+EGL VH P  S  +R  +  + L++V LDP S +RYP
Sbjct: 355 MQVVFQDPYGSLSPRMTVEQIISEGLEVHAP-CSLADRDAQVIQVLKDVGLDPASRHRYP 413

Query: 425 HEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRNIGYLFIS 484
           HEFSGGQRQRIAIARAL+L+P+ +LLDEPTSALDR+VQ  V+ LL+E+Q +  + YLFIS
Sbjct: 414 HEFSGGQRQRIAIARALVLKPALMLLDEPTSALDRTVQKQVVALLRELQDKYGLTYLFIS 473

Query: 485 HDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLIAAS 530
           HDLAVV+A++  ++V++ GQV+E+G++ ++F  PQH YTK+L+AA+
Sbjct: 474 HDLAVVRAMAHDMIVIKDGQVVERGASHAVFDAPQHPYTKELLAAA 519



 Score =  168 bits (425), Expect = 5e-46
 Identities = 93/237 (39%), Positives = 147/237 (62%), Gaps = 7/237 (2%)

Query: 303 VKGISLELKQGETLGIVGESGSGKSTLGRALIGLLP-----STGQIAFKGQDFRALSEKQ 357
           V+ +SL+++ GE L +VGESGSGKS    +++ LLP     +TG I ++GQ+    S   
Sbjct: 19  VRNLSLDVRPGECLALVGESGSGKSVTAHSILQLLPEAGTETTGSIQYRGQELIGASAAT 78

Query: 358 RLALKKD-IQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRA-LEEVRL 415
              L+ + I M+FQ+P  SL+P  ++ + I E LL+H+    K  + +      L  ++ 
Sbjct: 79  LQKLRGNRIAMIFQEPMTSLNPLHSIEKQIGETLLLHKGLGGKAAQARILELLDLVGIQK 138

Query: 416 DPNSINRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKR 475
               +  YPH+ SGGQRQR+ IA AL  EP  ++ DEPT+ALD +VQ  ++ LLK +QKR
Sbjct: 139 PQERLKAYPHQLSGGQRQRVMIAMALACEPELLIADEPTTALDVTVQRKILLLLKSLQKR 198

Query: 476 RNIGYLFISHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLIAASFD 532
             +  L ISHDL +V++++ RV VM+ G+++EQ   +++F+ PQH Y++ L+ A  D
Sbjct: 199 LGMSLLLISHDLNLVRSIAQRVCVMRAGEIVEQADCQTLFNAPQHPYSRLLLDAEPD 255